RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 GALNT6Q8NCL4 622 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 TOR1AIP2Q8NFQ8 470 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 LILRB1Q8NHL6 650 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 ZNF417Q8TAU3 575 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 PIP4K2CQ8TBX8 421 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 MYCBPAPQ8TBZ2 947 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 ATL1Q8WXF7 558 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 GATAD2BQ8WXI9 593 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 DHX38Q92620 1227 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 NKD1Q969G9 470 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CFAP36Q96G28 342 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 COG3Q96JB2 828 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 BTBD6Q96KE9 485 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 ZSCAN31Q96LW9 406 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 GBP5Q96PP8 586 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CCT8L2Q96SF2 557 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 ZNF587Q96SQ5 575 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 RIOK1Q9BRS2 568 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 NUF2Q9BZD4 464 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 NSRP1Q9H0G5 558 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CARD9Q9H257 536 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 NDST4Q9H3R1 872 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SEMA4AQ9H3S1 761 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 PICK1Q9NRD5 415 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SAMSN1Q9NSI8 373 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 TYW1Q9NV66 732 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 FAIMQ9NVQ4 179 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 EURLQ9NYK6 297 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 MAP3K20Q9NYL2 800 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CHPF2Q9P2E5 772 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 STAP2Q9UGK3 403 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 BAIAP2L1Q9UHR4 511 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CCPG1Q9ULG6 757 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 LRCH1Q9Y2L9 728 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 PCDHGB3Q9Y5G1 929 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SNX9Q9Y5X1 595 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 KDM5AP29375 1690 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 SPATA31D1Q6ZQQ2 1576 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 PRAG1Q86YV5 1406 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 CTAGE9A4FU28 777 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 VWA3AA6NCI4 1184 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 CENPBD1B2RD01 187 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HNRNPCL2B2RXH8 293 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 LINC01387J3KSC0 135 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 M0QX08 132 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 IFIT3O14879 490 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 IKBKBO14920 756 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 FSCN2O14926 492 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HGSO14964 777 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 TEX28O15482 410 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HNRNPCL1O60812 293 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 PFKFB2O60825 505 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ATP5HO75947 161 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 BPNT1O95861 308 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 LDHAP00338 332 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ASLP04424 464 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 GSTP1P09211 210 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 PRKAR2BP31323 418 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 RGS2P41220 211 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HALP42357 657 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 KRT6CP48668 564 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 MXI1P50539 228 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 GPC3P51654 580 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 KIF11P52732 1056 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 USP14P54578 494 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 KRT76Q01546 638 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ZNF252P-AS1Q0IIN9 211 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 DNAJC3Q13217 504 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ADAM9Q13443 819 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 CWF19L2Q2TBE0 894 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ARL13BQ3SXY8 428 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ACCSLQ4AC99 568 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HSP90AA5PQ58FG0 334 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HP1BP3Q5SSJ5 553 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 FCRLBQ6BAA4 426 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 OR52E8Q6IFG1 317 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 RUFY4Q6ZNE9 571 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 C1orf229Q6ZS94 237 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 PDZD3Q86UT5 571 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 CABP7Q86V35 215 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 VPS36Q86VN1 386 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 DCLK2Q8N568 766 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 EIF1ADQ8N9N8 165 aaKnown RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 LRRN4CLQ8ND94 238 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 TNIP2Q8NFZ5 429 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ANKRD49Q8WVL7 239 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 SLC7A3Q8WY07 619 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 CCT6BQ92526 530 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 CEP19Q96LK0 163 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 RAB3IPQ96QF0 476 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-219ENST00000542112 AIFM2Q9BRQ8 373 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HAUS8Q9BT25 410 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 KLHL4Q9C0H6 718 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 ATAD3AQ9NVI7 634 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 HAUS2Q9NVX0 235 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 UBP1Q9NZI7 540 aa4.67□□□□□ -1.66
SNHG1-219ENST00000542112 BTBD7Q9P203 1132 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms