RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 POMCP01189 267 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 SOD2P04179 222 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 URODP06132 367 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 NEFLP07196 543 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 ADH1AP07327 375 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 CNPP09543 421 aaKnown RBP16.61■□□□□ 0.25
ITM2C-208ENST00000541852 SP100P23497 879 aaPredicted RBP16.61■□□□□ 0.25
ITM2C-208ENST00000541852 CYP4A11Q02928 519 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 TCF15Q12870 199 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 C12orf76Q8N812 135 aaPredicted RBP16.61■□□□□ 0.25
ITM2C-208ENST00000541852 CMASQ8NFW8 434 aaPredicted RBP16.61■□□□□ 0.25
ITM2C-208ENST00000541852 HDAC7Q8WUI4 952 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 TRIM6Q9C030 488 aaPredicted RBP16.61■□□□□ 0.25
ITM2C-208ENST00000541852 TTC12Q9H892 705 aaPredicted RBP16.61■□□□□ 0.25
ITM2C-208ENST00000541852 LIMD1Q9UGP4 676 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 IPPQ9Y573 584 aa16.61■□□□□ 0.25
ITM2C-208ENST00000541852 ARL5CA6NH57 179 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 INO80B-WBP1J3KQ70 363 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 ARL2P36404 184 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 CLCN5P51795 746 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 TMC5Q6UXY8 1006 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 CCDC149Q6ZUS6 474 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 COLGALT2Q8IYK4 626 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
ITM2C-208ENST00000541852 BCL7CQ8WUZ0 217 aaPredicted RBP16.6■□□□□ 0.25
ITM2C-208ENST00000541852 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 RPS6KC1Q96S38 1066 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 GJB4Q9NTQ9 266 aa16.6■□□□□ 0.25
ITM2C-208ENST00000541852 ZBTB39O15060 712 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 NEMFO60524 1076 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 TSPAN1O60635 241 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 BRD1O95696 1058 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
ITM2C-208ENST00000541852 OR1G1P47890 313 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 AK2P54819 239 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 NR5A1Q13285 461 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
ITM2C-208ENST00000541852 STAMQ92783 540 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 HERC2P3Q9BVR0 1158 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 VN1R3Q9BXE9 311 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 RXFP1Q9HBX9 757 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.59■□□□□ 0.25
ITM2C-208ENST00000541852 IGSF9Q9P2J2 1179 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 ZMYM2Q9UBW7 1377 aa16.59■□□□□ 0.25
ITM2C-208ENST00000541852 CACNA1HO95180 2353 aa16.58■□□□□ 0.25
ITM2C-208ENST00000541852 GALR2O43603 387 aaPredicted RBP16.58■□□□□ 0.24
ITM2C-208ENST00000541852 ST18O60284 1047 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 TXKP42681 527 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 RARRES1P49788 294 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 AFF1P51825 1210 aaKnown RBP16.58■□□□□ 0.24
ITM2C-208ENST00000541852 VCPP55072 806 aaKnown RBP16.58■□□□□ 0.24
ITM2C-208ENST00000541852 CREMQ03060 361 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 DSC1Q08554 894 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.24
ITM2C-208ENST00000541852 KIAA0319Q5VV43 1072 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 MCPH1Q8NEM0 835 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 ATOH1Q92858 354 aaPredicted RBP16.58■□□□□ 0.24
ITM2C-208ENST00000541852 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 NXPE3Q969Y0 559 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 PRIMPOLQ96LW4 560 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 MTMR9Q96QG7 549 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 GAD1Q99259 594 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 MFSD1Q9H3U5 465 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 PLEKHA4Q9H4M7 779 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 XPNPEP1Q9NQW7 623 aa16.58■□□□□ 0.24
ITM2C-208ENST00000541852 BMP2KQ9NSY1 1161 aaPredicted RBP16.58■□□□□ 0.24
ITM2C-208ENST00000541852 A0A1B0GUA9 196 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 BTBD18B2RXH4 712 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 GLUD1P00367 558 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 SSBP05455 408 aaKnown RBP eCLIP16.57■□□□□ 0.24
ITM2C-208ENST00000541852 ARF4P18085 180 aaPredicted RBP16.57■□□□□ 0.24
ITM2C-208ENST00000541852 GLUD2P49448 558 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 DSG1Q02413 1049 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 MBTD1Q05BQ5 628 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 TDGQ13569 410 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 ME3Q16798 604 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 ASTLQ6HA08 431 aaPredicted RBP16.57■□□□□ 0.24
ITM2C-208ENST00000541852 SLC27A1Q6PCB7 646 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 DIS3L2Q8IYB7 885 aaKnown RBP16.57■□□□□ 0.24
ITM2C-208ENST00000541852 NACC1Q96RE7 527 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 EIF2AQ9BY44 585 aaKnown RBP16.57■□□□□ 0.24
ITM2C-208ENST00000541852 TUFT1Q9NNX1 390 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 CHST7Q9NS84 486 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 CDH22Q9UJ99 828 aa16.57■□□□□ 0.24
ITM2C-208ENST00000541852 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 B4GALT3O60512 393 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 EFEMP2O95967 443 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 GLRA2P23416 452 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 ORC2Q13416 577 aaPredicted RBP16.56■□□□□ 0.24
ITM2C-208ENST00000541852 CAPSQ13938 189 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 AMHR2Q16671 573 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 USP41Q3LFD5 358 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 KANK3Q6NY19 840 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 RNF168Q8IYW5 571 aaPredicted RBP16.56■□□□□ 0.24
ITM2C-208ENST00000541852 NECAB1Q8N987 351 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 NSUN7Q8NE18 718 aaKnown RBP16.56■□□□□ 0.24
ITM2C-208ENST00000541852 CPB2Q96IY4 423 aa16.56■□□□□ 0.24
ITM2C-208ENST00000541852 C2orf40Q9H1Z8 148 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms