RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 LTN1O94822 1766 aa6.21□□□□□ -1.41
DDB1-219ENST00000541513 NSD2O96028 1365 aa6.21□□□□□ -1.41
DDB1-219ENST00000541513 POM121BA6NF01 834 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 FIGNL2A6NMB9 653 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 ACKR2O00590 384 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 TERTO14746 1132 aaKnown RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 SPINT1O43278 529 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 TADA3O75528 432 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 TMEM63AO94886 807 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 GSNP06396 782 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 KCNA2P16389 499 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 SERPINF1P36955 418 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 AFF1P51825 1210 aaKnown RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 IRX3P78415 501 aaPredicted RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 LRP8Q14114 963 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 UAP1L1Q3KQV9 507 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 FAM47CQ5HY64 1035 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 ISM2Q6H9L7 571 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 TANGO2Q6ICL3 276 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 JMJD6Q6NYC1 403 aaPredicted RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 LBX2Q6XYB7 198 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 FRMD7Q6ZUT3 714 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 RASGRP2Q7LDG7 609 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 KCNK18Q7Z418 384 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 CPOQ8IVL8 374 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 ADCY4Q8NFM4 1077 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 SYTL5Q8TDW5 730 aaPredicted RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 PANK1Q8TE04 598 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 TTC9Q92623 222 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 HTRA1Q92743 480 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 CENPTQ96BT3 561 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 INSM2Q96T92 566 aaPredicted RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 PHF20Q9BVI0 1012 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 KATNAL1Q9BW62 490 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 CARD10Q9BWT7 1032 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 SORBS1Q9BX66 1292 aaKnown RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 USP26Q9BXU7 913 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 ARHGAP39Q9C0H5 1083 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 GHITMQ9H3K2 345 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 TRPV4Q9HBA0 871 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 CYP4F11Q9HBI6 524 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 C19orf53Q9UNZ5 99 aaPredicted RBP6.21□□□□□ -1.42
DDB1-219ENST00000541513 HIF3AQ9Y2N7 669 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 SNX13Q9Y5W8 968 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 FHOD1Q9Y613 1164 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 OVOS2A0A0J9YW53 1432 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 OVOS2Q6IE36 1432 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 NWD2Q9ULI1 1742 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 CGNL1Q0VF96 1302 aa6.21□□□□□ -1.42
DDB1-219ENST00000541513 NFAT5O94916 1531 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 ABCC6O95255 1503 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 NPC1L1Q9UHC9 1359 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 A0A1W2PPC4 97 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PRAMEF27A3QJZ7 478 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 H7C1D1 291 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 NPC1O15118 1278 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 DAPK3O43293 454 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 KDM1AO60341 852 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 AOC2O75106 756 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 EOMESO95936 686 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 AVPP01185 164 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 TPM2P07951 284 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 ENPP1P22413 925 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 GBP1P32455 592 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 ECI1P42126 302 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 USP11P51784 963 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 ITGA8P53708 1063 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 SRSF2Q01130 221 aaKnown RBP6.2□□□□□ -1.42
DDB1-219ENST00000541513 NRG1Q02297 640 aaPredicted RBP6.2□□□□□ -1.42
DDB1-219ENST00000541513 AUHQ13825 339 aaKnown RBP6.2□□□□□ -1.42
DDB1-219ENST00000541513 DAG1Q14118 895 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PTPN14Q15678 1187 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 FSCN1Q16658 493 aaKnown RBP6.2□□□□□ -1.42
DDB1-219ENST00000541513 SLC35G1Q2M3R5 365 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 ZMYM1Q5SVZ6 1142 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 ABRAXAS1Q6UWZ7 409 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 CARNMT1Q8N4J0 409 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 SLF1Q9BQI6 1058 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PDCD2LQ9BRP1 358 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PYM1Q9BRP8 204 aaKnown RBP6.2□□□□□ -1.42
DDB1-219ENST00000541513 ALG1Q9BT22 464 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 BOCQ9BWV1 1114 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 NRSN2Q9GZP1 204 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 ZFAND3Q9H8U3 227 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PREBQ9HCU5 417 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PNPLA8Q9NP80 782 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PICK1Q9NRD5 415 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 DCAF16Q9NXF7 216 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 TOR4AQ9NXH8 423 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 PRR13Q9NZ81 148 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 WDR35Q9P2L0 1181 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 MTRRQ9UBK8 725 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 STXBP5LQ9Y2K9 1186 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 COL18A1P39060 1754 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 COL14A1Q05707 1796 aaKnown RBP6.2□□□□□ -1.42
DDB1-219ENST00000541513 LRP6O75581 1613 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 SOS1Q07889 1333 aaPredicted RBP6.2□□□□□ -1.42
DDB1-219ENST00000541513 PLCH1Q4KWH8 1693 aa6.2□□□□□ -1.42
DDB1-219ENST00000541513 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.19□□□□□ -1.42
DDB1-219ENST00000541513 RGPD5Q99666 1765 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms