RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SIRT2Q8IXJ6 389 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 ST13P5Q8NFI4 369 aaPredicted RBP10.72□□□□□ -0.69
YBX3-211ENST00000541351 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 ELSPBP1Q96BH3 223 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 TRMT61BQ9BVS5 477 aaKnown RBP10.72□□□□□ -0.69
YBX3-211ENST00000541351 APOL6Q9BWW8 343 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 CNNM2Q9H8M5 875 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 UBN1Q9NPG3 1134 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 TMEM9BQ9NQ34 198 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 KCNH7Q9NS40 1196 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 FAM105AQ9NUU6 356 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 MAD2L2Q9UI95 211 aa10.72□□□□□ -0.69
YBX3-211ENST00000541351 IGKV6D-21A0A0A0MT36 114 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 CAPN8A6NHC0 703 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 RHOBTB1O94844 696 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 F5P12259 2224 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 NEDD4P46934 1319 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 FGD1P98174 961 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 PTGDRQ13258 359 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 CCDC6Q16204 474 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 UVSSAQ2YD98 709 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 PABPC1LQ4VXU2 614 aaKnown RBP10.71□□□□□ -0.69
YBX3-211ENST00000541351 TSHZ3Q63HK5 1081 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 EFCAB12Q6NXP0 572 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 SYNPOQ8N3V7 929 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 RSAD1Q9HA92 442 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 UNC79Q9P2D8 2635 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 MRPS23Q9Y3D9 190 aaKnown RBP10.71□□□□□ -0.69
YBX3-211ENST00000541351 PIAS3Q9Y6X2 628 aa10.71□□□□□ -0.69
YBX3-211ENST00000541351 MEIS2O14770 477 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 HYAL3O43820 417 aaPredicted RBP10.7□□□□□ -0.7
YBX3-211ENST00000541351 GPC3P51654 580 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 CLCN3P51790 818 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 KARSQ15046 597 aaKnown RBP10.7□□□□□ -0.7
YBX3-211ENST00000541351 LILRA6Q6PI73 481 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 ZNF605Q86T29 641 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 TBC1D10CQ8IV04 446 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 NPAS3Q8IXF0 933 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 ZNF687Q8N1G0 1237 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 LPPQ93052 612 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 EVI5LQ96CN4 794 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 RRP36Q96EU6 259 aaKnown RBP10.7□□□□□ -0.7
YBX3-211ENST00000541351 ZC3H10Q96K80 434 aaKnown RBP10.7□□□□□ -0.7
YBX3-211ENST00000541351 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 UBL7Q96S82 380 aaPredicted RBP10.7□□□□□ -0.7
YBX3-211ENST00000541351 COLEC11Q9BWP8 271 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 PSTPIP2Q9H939 334 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 ZFP14Q9HCL3 533 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 CHST7Q9NS84 486 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 ZBTB40Q9NUA8 1239 aa10.7□□□□□ -0.7
YBX3-211ENST00000541351 PIN4Q9Y237 131 aaKnown RBP10.7□□□□□ -0.7
YBX3-211ENST00000541351 PRG3Q9Y2Y8 225 aaPredicted RBP10.7□□□□□ -0.7
YBX3-211ENST00000541351 NBEAQ8NFP9 2946 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 ERICH2A1L162 156 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 K7ESF4 209 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 KHNYNO15037 678 aaKnown RBP10.69□□□□□ -0.7
YBX3-211ENST00000541351 CAVIN2O95810 425 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 C8AP07357 584 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 CHRNB1P11230 501 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 NCLP19338 710 aaKnown RBP10.69□□□□□ -0.7
YBX3-211ENST00000541351 OR1G1P47890 313 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 KIAA1211LQ6NV74 962 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 PDXDC1Q6P996 788 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 C11orf74Q86VG3 221 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 TEX2Q8IWB9 1127 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 CSGALNACT1Q8TDX6 532 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 PANK1Q8TE04 598 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 DEPDC1BQ8WUY9 529 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 MXRA8Q9BRK3 442 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 CCDC86Q9H6F5 360 aaKnown RBP10.69□□□□□ -0.7
YBX3-211ENST00000541351 C8orf33Q9H7E9 229 aaPredicted RBP10.69□□□□□ -0.7
YBX3-211ENST00000541351 FBXW11Q9UKB1 542 aa10.69□□□□□ -0.7
YBX3-211ENST00000541351 BPTFQ12830 3046 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 DMXL2Q8TDJ6 3036 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 FAM221BA6H8Z2 402 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 B4E1Z4 1266 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 ATG13O75143 517 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 TOP3BO95985 862 aaKnown RBP10.68□□□□□ -0.7
YBX3-211ENST00000541351 PSMC3P17980 439 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 DNM2P50570 870 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 HNRNPDQ14103 355 aaKnown RBP10.68□□□□□ -0.7
YBX3-211ENST00000541351 GRM4Q14833 912 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 ZNF423Q2M1K9 1284 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 ABHD15Q6UXT9 468 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 KBTBD6Q86V97 674 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 LURAP1LQ8IV03 231 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 RNF168Q8IYW5 571 aaPredicted RBP10.68□□□□□ -0.7
YBX3-211ENST00000541351 ITFG1Q8TB96 612 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 LY9Q9HBG7 655 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 ZNF334Q9HCZ1 680 aaPredicted RBP10.68□□□□□ -0.7
YBX3-211ENST00000541351 NRBP2Q9NSY0 501 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 ZSWIM5Q9P217 1185 aa10.68□□□□□ -0.7
YBX3-211ENST00000541351 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
YBX3-211ENST00000541351 MTCL1Q9Y4B5 1905 aaKnown RBP10.68□□□□□ -0.7
YBX3-211ENST00000541351 IGSF10Q6WRI0 2623 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms