RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 ENPP1P22413 925 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 PDIA3P30101 505 aaKnown RBP6.23□□□□□ -1.41
PRKDC-209ENST00000540819 GALNSP34059 522 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 CLK1P49759 484 aaKnown RBP6.23□□□□□ -1.41
PRKDC-209ENST00000540819 SRSF2Q01130 221 aaKnown RBP6.23□□□□□ -1.41
PRKDC-209ENST00000540819 ZNF543Q08ER8 600 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 SLC45A4Q5BKX6 768 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 DAAM2Q86T65 1068 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 TMTC1Q8IUR5 882 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 SIRT2Q8IXJ6 389 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 NDUFAF2Q8N183 169 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 THEMISQ8N1K5 641 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-209ENST00000540819 ESX1Q8N693 406 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 APIPQ96GX9 242 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 ZNF496Q96IT1 587 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-209ENST00000540819 C20orf173Q96LM9 149 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 ELF4Q99607 663 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-209ENST00000540819 CHCHD6Q9BRQ6 235 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 TOMM22Q9NS69 142 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 SIRT5Q9NXA8 310 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 TUBD1Q9UJT1 453 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 SLC12A8A0AV02 714 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 FAM47E-STBD1D6RA91 191 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 MSCO60682 206 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 TIPRLO75663 272 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 FAM200BP0CF97 657 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 GLULP15104 373 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 XBP1P17861 261 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 SLC9A1P19634 815 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 UBA7P41226 1012 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 SLC16A1P53985 500 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 ATXN1P54253 815 aaKnown RBP6.22□□□□□ -1.41
PRKDC-209ENST00000540819 LACTBP83111 547 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-209ENST00000540819 KCNAB2Q13303 367 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 CRY1Q16526 586 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 FSCN1Q16658 493 aaKnown RBP6.22□□□□□ -1.41
PRKDC-209ENST00000540819 TOR2AQ5JU69 321 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 CCDC30Q5VVM6 783 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 APOA5Q6Q788 366 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 RNF111Q6ZNA4 994 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 ZZZ3Q8IYH5 903 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 ZMAT2Q96NC0 199 aaKnown RBP6.22□□□□□ -1.41
PRKDC-209ENST00000540819 TSPAN18Q96SJ8 248 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 CGRRF1Q99675 332 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 COLEC11Q9BWP8 271 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 STK31Q9BXU1 1019 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 BRD9Q9H8M2 597 aa6.22□□□□□ -1.41
PRKDC-209ENST00000540819 MAGED1Q9Y5V3 778 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-209ENST00000540819 SHISA3A0PJX4 238 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 A6NLC8 198 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 KRT37O76014 449 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 OSMP13725 252 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 MTHFD2P13995 350 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 XPAP23025 273 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-209ENST00000540819 CD40P25942 277 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 ATICP31939 592 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 GALK1P51570 392 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 SLC5A3P53794 718 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 SRSF3P84103 164 aaKnown RBP6.21□□□□□ -1.42
PRKDC-209ENST00000540819 POU4F1Q01851 419 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 FOXO1Q12778 655 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 NMIQ13287 307 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-209ENST00000540819 POSTNQ15063 836 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 DPY19L1Q2PZI1 675 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 ZACNQ401N2 412 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 ADGRF1Q5T601 910 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 HIBCHQ6NVY1 386 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-209ENST00000540819 TMCO3Q6UWJ1 677 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 WAPLQ7Z5K2 1190 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 SNX32Q86XE0 403 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 C7orf31Q8N865 590 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 ATRIPQ8WXE1 791 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 LINC01599Q8WXQ3 324 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 NT5C1BQ96P26 610 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 MAGEH1Q9H213 219 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 MS4A5Q9H3V2 200 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 PCIF1Q9H4Z3 704 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 IPPKQ9H8X2 491 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 JMJD4Q9H9V9 463 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 VPS45Q9NRW7 570 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 GGA3Q9NZ52 723 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 GRHPRQ9UBQ7 328 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 EBF1Q9UH73 591 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 STXBP5LQ9Y2K9 1186 aa6.21□□□□□ -1.42
PRKDC-209ENST00000540819 FSD2A1L4K1 749 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 SYNDIG1LA6NDD5 238 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 GOLGA6L3A6NEY3 463 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 POM121BA6NF01 834 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 DDX3XO00571 662 aaKnown RBP eCLIP6.2□□□□□ -1.426e-16■■□□□ 12.3
PRKDC-209ENST00000540819 TBX18O95935 607 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 TSHRP16473 764 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 HSPA7P48741 367 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 ALDH9A1P49189 494 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 IRF9Q00978 393 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 CACNB2Q08289 660 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-209ENST00000540819 PSMD6Q15008 389 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 IQCEQ6IPM2 695 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 KCNK18Q7Z418 384 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 GALNT15Q8N3T1 639 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms