RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 HPS3Q969F9 1004 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 PGBD4Q96DM1 585 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 BICD1Q96G01 975 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 RAD9AQ99638 391 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 TCHPQ9BT92 498 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 TARS2Q9BW92 718 aaKnown RBP17.02■□□□□ 0.32
DDB1-218ENST00000540784 TRIM6Q9C030 488 aaPredicted RBP17.02■□□□□ 0.32
DDB1-218ENST00000540784 TMEM161AQ9NX61 479 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 MSRAQ9UJ68 235 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 INSL6Q9Y581 213 aa17.02■□□□□ 0.32
DDB1-218ENST00000540784 KLRC4O43908 158 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 EDN1P05305 212 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 SMAD3P84022 425 aaKnown RBP17.01■□□□□ 0.31
DDB1-218ENST00000540784 ALCAMQ13740 583 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 KMT5BQ4FZB7 885 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 FAM26FQ5R3K3 315 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 ZPBP2Q6X784 338 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 MRPL10Q7Z7H8 261 aaKnown RBP17.01■□□□□ 0.31
DDB1-218ENST00000540784 CRIPAKQ8N1N5 446 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 ACCSQ96QU6 501 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 ADPGKQ9BRR6 497 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 STRA6Q9BX79 667 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 EIF2AQ9BY44 585 aaKnown RBP17.01■□□□□ 0.31
DDB1-218ENST00000540784 PDZD7Q9H5P4 517 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 EXOC1Q9NV70 894 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 PCDHA11Q9Y5I1 949 aa17.01■□□□□ 0.31
DDB1-218ENST00000540784 SMC2O95347 1197 aa17■□□□□ 0.31
DDB1-218ENST00000540784 NPTXRO95502 500 aa17■□□□□ 0.31
DDB1-218ENST00000540784 MYBP10242 640 aa17■□□□□ 0.31
DDB1-218ENST00000540784 PNOCQ13519 176 aa17■□□□□ 0.31
DDB1-218ENST00000540784 RAB30Q15771 203 aa17■□□□□ 0.31
DDB1-218ENST00000540784 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
DDB1-218ENST00000540784 HACE1Q8IYU2 909 aa17■□□□□ 0.31
DDB1-218ENST00000540784 YME1L1Q96TA2 773 aa17■□□□□ 0.31
DDB1-218ENST00000540784 EXOC7Q9UPT5 735 aa17■□□□□ 0.31
DDB1-218ENST00000540784 HOXA2O43364 376 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 TOM1L1O75674 476 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 PPP1R37O75864 691 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 DGKIO75912 1065 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
DDB1-218ENST00000540784 ITGA4P13612 1032 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 MATR3P43243 847 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDB1-218ENST00000540784 LIG4P49917 911 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 CASP5P51878 434 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 EHHADHQ08426 723 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
DDB1-218ENST00000540784 EEF1DP3Q658K8 133 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 ZBTB33Q86T24 672 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 ZNF598Q86UK7 904 aaKnown RBP16.99■□□□□ 0.31
DDB1-218ENST00000540784 SYCP3Q8IZU3 236 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 TMEM206Q9H813 350 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 PTPRHQ9HD43 1115 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 UBN1Q9NPG3 1134 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 IPPQ9Y573 584 aa16.99■□□□□ 0.31
DDB1-218ENST00000540784 HNRNPDLO14979 420 aaKnown RBP16.98■□□□□ 0.31
DDB1-218ENST00000540784 CLDN3O15551 220 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 PIGRP01833 764 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 FGFR1P11362 822 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 MYOGP15173 224 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 PBX2P40425 430 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 HTRA4P83105 476 aaPredicted RBP16.98■□□□□ 0.31
DDB1-218ENST00000540784 KCNB1Q14721 858 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 DCAF4L1Q3SXM0 396 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 MPZL3Q6UWV2 235 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 MAP4K3Q8IVH8 894 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 ABI1Q8IZP0 508 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 SMG8Q8ND04 991 aaKnown RBP16.98■□□□□ 0.31
DDB1-218ENST00000540784 ZNF507Q8TCN5 953 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 LPPQ93052 612 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 ZBTB45Q96K62 511 aaPredicted RBP16.98■□□□□ 0.31
DDB1-218ENST00000540784 FGFBP2Q9BYJ0 223 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 PBX4Q9BYU1 374 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 RMND1Q9NWS8 449 aa16.98■□□□□ 0.31
DDB1-218ENST00000540784 EIF3DO15371 548 aaKnown RBP eCLIP16.97■□□□□ 0.31
DDB1-218ENST00000540784 RHOBTB3O94955 611 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 MCF2P10911 925 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 ATF7P17544 494 aaPredicted RBP16.97■□□□□ 0.31
DDB1-218ENST00000540784 PROZP22891 400 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 KCNA1Q09470 495 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 STK4Q13043 487 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 ZNF568Q3ZCX4 644 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 SLFN12LQ6IEE8 588 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 EPM2AIP1Q7L775 607 aaPredicted RBP16.97■□□□□ 0.31
DDB1-218ENST00000540784 GLIS3Q8NEA6 775 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 ZNF689Q96CS4 500 aaPredicted RBP16.97■□□□□ 0.31
DDB1-218ENST00000540784 GSDMAQ96QA5 445 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 APOL6Q9BWW8 343 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 ANKFY1Q9P2R3 1169 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 PARP2Q9UGN5 583 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 HES2Q9Y543 173 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 PCDHA5Q9Y5H7 936 aa16.97■□□□□ 0.31
DDB1-218ENST00000540784 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 ANKRD63C9JTQ0 380 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 OFD1O75665 1012 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms