RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 VCPP55072 806 aaKnown RBP21.43■■□□□ 1.02
SOD2-212ENST00000540491 C12orf76Q8N812 135 aaPredicted RBP21.43■■□□□ 1.02
SOD2-212ENST00000540491 OXER1Q8TDS5 423 aa21.43■■□□□ 1.02
SOD2-212ENST00000540491 CSRNP2Q9H175 543 aa21.43■■□□□ 1.02
SOD2-212ENST00000540491 GIT1Q9Y2X7 761 aa21.43■■□□□ 1.02
SOD2-212ENST00000540491 ZMYM2Q9UBW7 1377 aa21.43■■□□□ 1.02
SOD2-212ENST00000540491 ST18O60284 1047 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 CNPP09543 421 aaKnown RBP21.42■■□□□ 1.02
SOD2-212ENST00000540491 CTTNQ14247 550 aaKnown RBP21.42■■□□□ 1.02
SOD2-212ENST00000540491 TMC5Q6UXY8 1006 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 HDAC7Q8WUI4 952 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 CCDC43Q96MW1 224 aaKnown RBP21.42■■□□□ 1.02
SOD2-212ENST00000540491 RPS6KC1Q96S38 1066 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 EIF2AK1Q9BQI3 630 aaKnown RBP21.42■■□□□ 1.02
SOD2-212ENST00000540491 HERC2P3Q9BVR0 1158 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 VN1R3Q9BXE9 311 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 LIMD1Q9UGP4 676 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 IPPQ9Y573 584 aa21.42■■□□□ 1.02
SOD2-212ENST00000540491 GALR2O43603 387 aaPredicted RBP21.41■■□□□ 1.02
SOD2-212ENST00000540491 TSPAN1O60635 241 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 POMCP01189 267 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 CLCN5P51795 746 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 CYP4A11Q02928 519 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 DSC1Q08554 894 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 CALCRLQ16602 461 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 COLGALT2Q8IYK4 626 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 SMG8Q8ND04 991 aaKnown RBP21.41■■□□□ 1.02
SOD2-212ENST00000540491 TNFRSF25Q93038 417 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 COLEC11Q9BWP8 271 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 TRIM6Q9C030 488 aaPredicted RBP21.41■■□□□ 1.02
SOD2-212ENST00000540491 CDH22Q9UJ99 828 aa21.41■■□□□ 1.02
SOD2-212ENST00000540491 MYO10Q9HD67 2058 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 ARL5CA6NH57 179 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 INO80B-WBP1J3KQ70 363 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 CTDNEP1O95476 244 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 ARL2P36404 184 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 RNF168Q8IYW5 571 aaPredicted RBP21.4■■□□□ 1.02
SOD2-212ENST00000540491 STAMQ92783 540 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 TTC12Q9H892 705 aaPredicted RBP21.4■■□□□ 1.02
SOD2-212ENST00000540491 RXFP1Q9HBX9 757 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 XPNPEP1Q9NQW7 623 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.4■■□□□ 1.02
SOD2-212ENST00000540491 IGSF9Q9P2J2 1179 aa21.4■■□□□ 1.02
SOD2-212ENST00000540491 B4GALT3O60512 393 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 NEMFO60524 1076 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 WEE2P0C1S8 567 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 OR1G1P47890 313 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 AFF1P51825 1210 aaKnown RBP21.39■■□□□ 1.01
SOD2-212ENST00000540491 NR5A1Q13285 461 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 TRIM29Q14134 588 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 EARS2Q5JPH6 523 aaKnown RBP21.39■■□□□ 1.01
SOD2-212ENST00000540491 ASTLQ6HA08 431 aaPredicted RBP21.39■■□□□ 1.01
SOD2-212ENST00000540491 ATOH1Q92858 354 aaPredicted RBP21.39■■□□□ 1.01
SOD2-212ENST00000540491 GAD1Q99259 594 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 PLEKHA4Q9H4M7 779 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 GJB4Q9NTQ9 266 aa21.39■■□□□ 1.01
SOD2-212ENST00000540491 PAPLNO95428 1278 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 EFEMP2O95967 443 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 GLUD1P00367 558 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 FDPSP14324 419 aaKnown RBP21.38■■□□□ 1.01
SOD2-212ENST00000540491 GLUD2P49448 558 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 RARRES1P49788 294 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 AK2P54819 239 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 DSG1Q02413 1049 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 CREMQ03060 361 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 MBTD1Q05BQ5 628 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 TDGQ13569 410 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 KIAA0319Q5VV43 1072 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 NXPE3Q969Y0 559 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 PRIMPOLQ96LW4 560 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 MFSD1Q9H3U5 465 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 BMP2KQ9NSY1 1161 aaPredicted RBP21.38■■□□□ 1.01
SOD2-212ENST00000540491 MARCH5Q9NX47 278 aa21.38■■□□□ 1.01
SOD2-212ENST00000540491 A0A1B0GUA9 196 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 PROB1E7EW31 1015 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 ZBTB39O15060 712 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 SSBP05455 408 aaKnown RBP eCLIP21.37■■□□□ 1.01
SOD2-212ENST00000540491 ASGR2P07307 311 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 MLH1P40692 756 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 CAPSQ13938 189 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 SLC27A1Q6PCB7 646 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 MCPH1Q8NEM0 835 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 GTF3C6Q969F1 213 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 PHOX2BQ99453 314 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 EIF2AQ9BY44 585 aaKnown RBP21.37■■□□□ 1.01
SOD2-212ENST00000540491 CHST7Q9NS84 486 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 PRG3Q9Y2Y8 225 aaPredicted RBP21.37■■□□□ 1.01
SOD2-212ENST00000540491 KMT2EQ8IZD2 1858 aa21.37■■□□□ 1.01
SOD2-212ENST00000540491 TEX28O15482 410 aa21.36■■□□□ 1.01
SOD2-212ENST00000540491 PDGFBP01127 241 aaPredicted RBP21.36■■□□□ 1.01
SOD2-212ENST00000540491 ARF4P18085 180 aaPredicted RBP21.36■■□□□ 1.01
SOD2-212ENST00000540491 AMHR2Q16671 573 aa21.36■■□□□ 1.01
SOD2-212ENST00000540491 KANK3Q6NY19 840 aa21.36■■□□□ 1.01
SOD2-212ENST00000540491 MTMR9Q96QG7 549 aa21.36■■□□□ 1.01
SOD2-212ENST00000540491 WDR6Q9NNW5 1121 aaKnown RBP21.36■■□□□ 1.01
SOD2-212ENST00000540491 MAN1C1Q9NR34 630 aa21.36■■□□□ 1.01
SOD2-212ENST00000540491 FNIP2Q9P278 1114 aa21.36■■□□□ 1.01
SOD2-212ENST00000540491 DUSP12Q9UNI6 340 aa21.36■■□□□ 1.01
SOD2-212ENST00000540491 CCDC195A0A1B0GUA6 201 aa21.35■■□□□ 1.01
SOD2-212ENST00000540491 GLRA2P23416 452 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms