RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CLCN5P51795 746 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 TFDP1Q14186 410 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 NCAPH2Q6IBW4 605 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 NOTUMQ6P988 496 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 ELMSAN1Q6PJG2 1045 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 COLGALT2Q8IYK4 626 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 TMEM105Q8N8V8 129 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 RPS6KC1Q96S38 1066 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 SMOC2Q9H3U7 446 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 XPNPEP1Q9NQW7 623 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 MARCH5Q9NX47 278 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 IPPQ9Y573 584 aa13.38□□□□□ -0.27
CBX3P4-202ENST00000540428 DGAT1O75907 488 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 SLITRK3O94933 977 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 SSBP05455 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 ADH1AP07327 375 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 CYP4A11Q02928 519 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 DSC1Q08554 894 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 TDGQ13569 410 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 TPH2Q8IWU9 490 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 GPR65Q8IYL9 337 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 HSD17B14Q9BPX1 270 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 NFKBIZQ9BYH8 718 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 ANKEF1Q9NU02 776 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 IGSF9Q9P2J2 1179 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 GIT1Q9Y2X7 761 aa13.37□□□□□ -0.27
CBX3P4-202ENST00000540428 ZMYM2Q9UBW7 1377 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 ARL5CA6NH57 179 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 TEX28O15482 410 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 NR1I2O75469 434 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 PAPLNO95428 1278 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 KRT2P35908 639 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 ARL2P36404 184 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 NBL1P41271 181 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 OR1G1P47890 313 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 GLUD2P49448 558 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 AK2P54819 239 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 DSG1Q02413 1049 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 ANKRD1Q15327 319 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 EARS2Q5JPH6 523 aaKnown RBP13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 KIAA0319Q5VV43 1072 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 HDAC7Q8WUI4 952 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 STAMQ92783 540 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 TNFRSF25Q93038 417 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 GAD1Q99259 594 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 EIF2AK1Q9BQI3 630 aaKnown RBP13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 MAN1C1Q9NR34 630 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 PCDHA12Q9UN75 941 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 DUSP12Q9UNI6 340 aa13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 PRG3Q9Y2Y8 225 aaPredicted RBP13.36□□□□□ -0.27
CBX3P4-202ENST00000540428 INO80B-WBP1J3KQ70 363 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 C2CD2LO14523 706 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 ZBTB39O15060 712 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 GLUD1P00367 558 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 MLH1P40692 756 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 SCNN1GP51170 649 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 ANAPC15P60006 121 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 MBTD1Q05BQ5 628 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 NR5A1Q13285 461 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 AMHR2Q16671 573 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 CWF19L1Q69YN2 538 aaKnown RBP13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 FEZF2Q8TBJ5 459 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 COLEC11Q9BWP8 271 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 TRIM6Q9C030 488 aaPredicted RBP13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 KCNK12Q9HB15 430 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 WDR6Q9NNW5 1121 aaKnown RBP13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 CHST7Q9NS84 486 aa13.35□□□□□ -0.27
CBX3P4-202ENST00000540428 DENND4AQ7Z401 1863 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 CCDC195A0A1B0GUA6 201 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 XRCC6P12956 609 aaKnown RBP eCLIP13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 FDPSP14324 419 aaKnown RBP13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 ARF4P18085 180 aaPredicted RBP13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 AOC1P19801 751 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 RARRES1P49788 294 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 CAPSQ13938 189 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 CALCRLQ16602 461 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 ASAP3Q8TDY4 903 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
CBX3P4-202ENST00000540428 CPB2Q96IY4 423 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms