RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 OTOGLQ3ZCN5 2332 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 MAST4O15021 2626 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 VWA3AA6NCI4 1184 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 LOC730098B7Z3J9 87 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 NT5C1B-RDH14C9J2C7 533 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 C5orf67F2Z3F1 127 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 F8W810 466 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 CYP11B2P19099 503 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 PHKA2P46019 1235 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 MCM2P49736 904 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 ERVFC1P60507 584 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 RAD51AP2Q09MP3 1159 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 HYAL1Q12794 435 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 MAPK7Q13164 816 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 PKP1Q13835 747 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 CBX2Q14781 532 aaPredicted RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 PTPAQ15257 358 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 ZRSR1Q15695 479 aaKnown RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 OTUD6AQ7L8S5 288 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 ZNF410Q86VK4 478 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 ZNF280BQ86YH2 543 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 VN1R2Q8NFZ6 395 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 SNX29Q8TEQ0 813 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 NAP1L5Q96NT1 182 aaPredicted RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 CLIC6Q96NY7 704 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 MTRQ99707 1265 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 VN1R3Q9BXE9 311 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 BHMT2Q9H2M3 363 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 SEMA4AQ9H3S1 761 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 NSUN3Q9H649 340 aaKnown RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 ATP6V0A4Q9HBG4 840 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 TUFT1Q9NNX1 390 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 C1orf112Q9NSG2 853 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 AGPAT5Q9NUQ2 364 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 MIOSQ9NXC5 875 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 DBR1Q9UK59 544 aaKnown RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 LRFN2Q9ULH4 789 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 NOL7Q9UMY1 257 aaKnown RBP8.03□□□□□ -1.12
LMO3-220ENST00000539232 PCDHB2Q9Y5E7 798 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 ZFYVE26Q68DK2 2539 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 DMDP11532 3685 aa8.03□□□□□ -1.12
LMO3-220ENST00000539232 FSD2A1L4K1 749 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 SFI1A8K8P3 1242 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 INO80B-WBP1J3KQ70 363 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 MEFVO15553 781 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 OFD1O75665 1012 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 DGAT1O75907 488 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 DDHD2O94830 711 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 STAG3L1P0CL83 205 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 XRCC6P12956 609 aaKnown RBP eCLIP8.02□□□□□ -1.13
LMO3-220ENST00000539232 ARF4P18085 180 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 MARCKSP29966 332 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 CACNB1Q02641 598 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 CEBPZQ03701 1054 aaKnown RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 ORC2Q13416 577 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 PDIA5Q14554 519 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 SF3A1Q15459 793 aaKnown RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 CTC1Q2NKJ3 1217 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 TMEM119Q4V9L6 283 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 ARSHQ5FYA8 562 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 EEF1DP3Q658K8 133 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 TWF2Q6IBS0 349 aaKnown RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 TAS1R3Q7RTX0 852 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 SRGAP1Q7Z6B7 1085 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 MRPL10Q7Z7H8 261 aaKnown RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 COLGALT1Q8NBJ5 622 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 RABGGTAQ92696 567 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 RIPOR3Q96MK2 946 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 ZFP42Q96MM3 310 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 NACC1Q96RE7 527 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 INO80BQ9C086 356 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 TMEM117Q9H0C3 514 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 CCDC113Q9H0I3 377 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 NXF3Q9H4D5 531 aaKnown RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 ELAC1Q9H777 363 aaKnown RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 RRAGDQ9NQL2 400 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 FAM105AQ9NUU6 356 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 DNAJB4Q9UDY4 337 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 INPP5FQ9Y2H2 1132 aa8.02□□□□□ -1.13
LMO3-220ENST00000539232 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.02□□□□□ -1.13
LMO3-220ENST00000539232 ARHGEF35A5YM69 484 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 GOLGA6L3A6NEY3 463 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 LRRIQ4A6NIV6 560 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 HIDE1A8MVS5 230 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 PER2O15055 1255 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 DKC1O60832 514 aaKnown RBP eCLIP8.01□□□□□ -1.13
LMO3-220ENST00000539232 HIP1RO75146 1068 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 FGF18O76093 207 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 ZSCAN20P17040 1043 aaPredicted RBP8.01□□□□□ -1.13
LMO3-220ENST00000539232 LIG1P18858 919 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 PTMSP20962 102 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 SFPQP23246 707 aaKnown RBP eCLIP8.01□□□□□ -1.13
LMO3-220ENST00000539232 AKAP5P24588 427 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 PRPHP41219 470 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 CLUL1Q15846 466 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 RILPL1Q5EBL4 403 aa8.01□□□□□ -1.13
LMO3-220ENST00000539232 NT5DC1Q5TFE4 455 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms