RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 SRGAP2CP0DJJ0 459 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 ITGA4P13612 1032 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 MLH1P40692 756 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 RCAN1P53805 252 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 NPEPPSP55786 919 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 HTR4Q13639 388 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 KIAA0319Q5VV43 1072 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 CYP26C1Q6V0L0 522 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 SUMF1Q8NBK3 374 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 CCDC148Q8NFR7 591 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 RDM1Q8NG50 284 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 TBCKQ8TEA7 893 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 RPP25Q9BUL9 199 aaKnown RBP16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 NCDNQ9UBB6 729 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 FRYLO94915 3013 aa16.38■□□□□ 0.21
CCDC144NL-202ENST00000539177 ANHXE9PGG2 379 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 TGM5O43548 720 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 GAS2O43903 313 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 RPL17P18621 184 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 NCLP19338 710 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 HOXA11P31270 313 aaPredicted RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 SCNN1GP51170 649 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 USP11P51784 963 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 DSG1Q02413 1049 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 RNF168Q8IYW5 571 aaPredicted RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 MAML2Q8IZL2 1156 aaPredicted RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 ZNF579Q8NAF0 562 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 SMG8Q8ND04 991 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 GAD1Q99259 594 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 APOL6Q9BWW8 343 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 EIF2AQ9BY44 585 aaKnown RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 RHOBTB2Q9BYZ6 727 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 RXFP1Q9HBX9 757 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 SLC2A4RGQ9NR83 387 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 SPATA6Q9NWH7 488 aaPredicted RBP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 HES2Q9Y543 173 aa16.37■□□□□ 0.21
CCDC144NL-202ENST00000539177 ARL5CA6NH57 179 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 NLRP5P59047 1200 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 GPC5P78333 572 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 Q4G0T1 1027 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 B3GNT9Q6UX72 402 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 Q6ZUG5 572 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 SRGAP1Q7Z6B7 1085 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 SLC7A3Q8WY07 619 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 FGF14Q92915 247 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 BRF1Q92994 677 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 ZFP42Q96MM3 310 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 JPH2Q9BR39 696 aaPredicted RBP16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 PRKD2Q9BZL6 878 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 IPPQ9Y573 584 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
CCDC144NL-202ENST00000539177 NOTCH4Q99466 2003 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 ERLIN2O94905 339 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 EFEMP2O95967 443 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 FSHRP23945 695 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 PSMC5P62195 406 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 NTHL1P78549 312 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 DSC1Q08554 894 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 LAMTOR4Q0VGL1 99 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 UBXN2BQ14CS0 331 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 PARM1Q6UWI2 310 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 RABGGTAQ92696 567 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 CEP170P1Q96L14 293 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 GPR62Q9BZJ7 368 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 PLEKHA4Q9H4M7 779 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 ZDHHC7Q9NXF8 308 aa16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 MTF2Q9Y483 593 aaPredicted RBP16.35■□□□□ 0.21
CCDC144NL-202ENST00000539177 GPR179Q6PRD1 2367 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 EML1O00423 815 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 LAMTOR5O43504 91 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 STARD6P59095 220 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 FUT10Q6P4F1 479 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 GRASPQ7Z6J2 395 aaPredicted RBP16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 RNF149Q8NC42 400 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 ETNPPLQ8TBG4 499 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 HDAC7Q8WUI4 952 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 SHDQ96IW2 340 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 BCO2Q9BYV7 579 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 UBN1Q9NPG3 1134 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 CACNG4Q9UBN1 327 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 NID2Q14112 1375 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 SPTBN2O15020 2390 aa16.34■□□□□ 0.21
CCDC144NL-202ENST00000539177 KANSL1LA0AUZ9 987 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 NR1I2O75469 434 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms