RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 KCNAB3O43448 404 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 CRTAMO95727 393 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 BMP15O95972 392 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 PRLP01236 227 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 RESTQ13127 1097 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 ZNF169Q14929 603 aaPredicted RBP2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 METTL24Q5JXM2 366 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 PRAMEF9Q5VWM5 478 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 PDPRQ8NCN5 879 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 HNRNPLLQ8WVV9 542 aaKnown RBP2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 UIMC1Q96RL1 719 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 PDCD2LQ9BRP1 358 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 ALOXE3Q9BYJ1 711 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 CCSER2Q9H7U1 834 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 IL17RBQ9NRM6 502 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 ASB6Q9NWX5 421 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 R3HCC1Q9Y3T6 440 aaKnown RBP2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 KIF27Q86VH2 1401 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 CTTNBP2Q8WZ74 1663 aa2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 PRR5-ARHGAP8B1AHC4 643 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 MTSS1O43312 755 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 KRT37O76014 449 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 HLA-DOAP06340 250 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 PDIA4P13667 645 aaKnown RBP2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 RARRES1P49788 294 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 PROK1P58294 105 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 OCA2Q04671 838 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 DDB1Q16531 1140 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 SRSF7Q16629 238 aaKnown RBP eCLIP2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 DDR2Q16832 855 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 PIK3R6Q5UE93 754 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 RUSC1-AS1Q66K80 236 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 ZNF788Q6ZQV5 615 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 SYT12Q8IV01 421 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 LRRC47Q8N1G4 583 aaKnown RBP2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 E2F7Q96AV8 911 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 MAML3Q96JK9 1138 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 Q96MF0 132 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 CDC6Q99741 560 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 ENKD1Q9H0I2 346 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 CAPN10Q9HC96 672 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 SAMD9Q5K651 1589 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 MAST3O60307 1309 aa2.9□□□□□ -1.95
CBX3P4-201ENST00000538909 UGGT2Q9NYU1 1516 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 POLR2AP24928 1970 aaKnown RBP2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 B4E1Z4 1266 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 NRP1O14786 923 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 IGKV2-30P06310 120 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 C6orf222P0C671 652 aaPredicted RBP2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 SPATA31D3P0C874 917 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 NAT1P18440 290 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 FDXRP22570 491 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 CACNA2D1P54289 1103 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 IRF9Q00978 393 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 MRPL49Q13405 166 aaKnown RBP2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 FHL1Q13642 323 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 AKNAD1Q5T1N1 836 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 SPATA31D4Q6ZUB0 917 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 BMP8AQ7Z5Y6 402 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 OR10H5Q8NGA6 315 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 IL17RAQ96F46 866 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 HIRIP3Q9BW71 556 aaPredicted RBP2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 TGIF2Q9GZN2 237 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 ZNF408Q9H9D4 720 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 INTS7Q9NVH2 962 aaKnown RBP2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 RAPGEF2Q9Y4G8 1499 aa2.89□□□□□ -1.95
CBX3P4-201ENST00000538909 KIAA0586Q9BVV6 1533 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 CARMIL1Q5VZK9 1371 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 ERCC6L2Q5T890 1561 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 UBA6A0AVT1 1052 aaPredicted RBP2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 ALDH1A2O94788 518 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 HSP90B1P14625 803 aaKnown RBP2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 SUMO1P63165 101 aaKnown RBP2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 MXRA7P84157 204 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 FAM209AQ5JX71 171 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 Q6ZNX1 250 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 DOK3Q7L591 496 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 GPR149Q86SP6 731 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 TUBGCP5Q96RT8 1024 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 ADGRE3Q9BY15 652 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 LRIT1Q9P2V4 623 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 SYNPO2Q9UMS6 1093 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 USP15Q9Y4E8 981 aaPredicted RBP2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 FPGT-TNNI3KV9GXZ4 949 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 ARHGEF11O15085 1522 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 DISP1Q96F81 1524 aa2.88□□□□□ -1.95
CBX3P4-201ENST00000538909 IQGAP2Q13576 1575 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 SETD1BQ9UPS6 1966 aaKnown RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 RIMBP3CA6NJZ7 1639 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 RIMBP3BA6NNM3 1639 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 KIAA0556O60303 1618 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 RIMBP3Q9UFD9 1639 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 TRBV23-1A0A0A0MS06 115 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 MANSC4A6NHS7 340 aaPredicted RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 DIRC3C9JPN6 131 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 CDKL5O76039 1030 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 FOSP01100 380 aaPredicted RBP2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 GAAP10253 952 aa2.87□□□□□ -1.95
CBX3P4-201ENST00000538909 CCKBRP32239 447 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms