RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 TRIML1Q8N9V2 468 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 ZNF507Q8TCN5 953 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 LINC01599Q8WXQ3 324 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 RNPC3Q96LT9 517 aaKnown RBP13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 ACO2Q99798 780 aaKnown RBP13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 TCHPQ9BT92 498 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 TRAIPQ9BWF2 469 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 PDZD7Q9H5P4 517 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 RGS18Q9NS28 235 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 ANKFY1Q9P2R3 1169 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 MAN1B1Q9UKM7 699 aa13.97□□□□□ -0.17
CDK2AP1-204ENST00000538446 SKIP12755 728 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 BMP8BP34820 402 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 WDR5P61964 334 aaKnown RBP13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 KNOP1Q1ED39 458 aaKnown RBP13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 BMT2Q1RMZ1 405 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 DCAF4L1Q3SXM0 396 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 ZNF568Q3ZCX4 644 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 CAVIN1Q6NZI2 390 aaKnown RBP13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 MPZL3Q6UWV2 235 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 RTN4RL1Q86UN2 441 aaPredicted RBP13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 CDR2LQ86X02 465 aaPredicted RBP13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 NELFCDQ8IXH7 590 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 MYOCDQ8IZQ8 938 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 SCFD1Q8WVM8 642 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 FAM105AQ9NUU6 356 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 SLC4A7Q9Y6M7 1214 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 EVPLQ92817 2033 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 LTBP2Q14767 1821 aa13.96□□□□□ -0.17
CDK2AP1-204ENST00000538446 A0A0U1RQF3 1178 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 C9IYK1 514 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 CLDN3O15551 220 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 NPTXRO95502 500 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 STAG3L1P0CL83 205 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 IBSPP21815 317 aaPredicted RBP13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 STIM1Q13586 685 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 MORC3Q14149 939 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 SHHQ15465 462 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 C9orf50Q5SZB4 431 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 EEF1DP3Q658K8 133 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 SLFN12LQ6IEE8 588 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 ZBTB33Q86T24 672 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 SMYD4Q8IYR2 804 aaPredicted RBP13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 HACE1Q8IYU2 909 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 GUF1Q8N442 669 aaKnown RBP13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 EIF2AQ9BY44 585 aaKnown RBP13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 GBP3Q9H0R5 595 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 PTPRHQ9HD43 1115 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 CXXC1Q9P0U4 656 aaPredicted RBP13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 TMEM63CQ9P1W3 806 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 LRFN2Q9ULH4 789 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 MAPK8IP1Q9UQF2 711 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 PCDHB2Q9Y5E7 798 aa13.95□□□□□ -0.18
CDK2AP1-204ENST00000538446 MCF2P10911 925 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 PROZP22891 400 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 PPP1R2P41236 205 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 DEFB103AP81534 67 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 MCL1Q07820 350 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 NOLC1Q14978 699 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 UBXN11Q5T124 520 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 RBM43Q6ZSC3 357 aaKnown RBP13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 ECHDC2Q86YB7 292 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 NPAS4Q8IUM7 802 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 RNF169Q8NCN4 708 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 GOLGA5Q8TBA6 731 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 PGBD4Q96DM1 585 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 SLC9A7Q96T83 725 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 CDT1Q9H211 546 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 ELAC1Q9H777 363 aaKnown RBP13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 PCDHB7Q9Y5E2 793 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 ZMYM2Q9UBW7 1377 aa13.94□□□□□ -0.18
CDK2AP1-204ENST00000538446 SIP14410 1827 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 TISP43B9A030 160 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 ANKRD63C9JTQ0 380 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 ABLIM1O14639 778 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 PSMA7O14818 248 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 ZNF623O75123 536 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 EOMESO95936 686 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 ATP2A2P16615 1042 aaKnown RBP13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 HOXD13P35453 343 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 PRCPP42785 496 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 FAM189BP81408 668 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 RASIP1Q5U651 963 aa13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 PRPF38BQ5VTL8 546 aaKnown RBP13.93□□□□□ -0.18
CDK2AP1-204ENST00000538446 ARMCX5Q6P1M9 558 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms