RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GPC3P51654 580 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CRYBB1P53674 252 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 PMS1P54277 932 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 FANCCQ00597 558 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 FKBP15Q5T1M5 1219 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ATF7IP2Q5U623 682 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 SESTD1Q86VW0 696 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 MAP4K3Q8IVH8 894 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 FAM186BQ8IYM0 893 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CNOT6LQ96LI5 555 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TARS2Q9BW92 718 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TRIM6Q9C030 488 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 VPS16Q9H269 839 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 KCTD10Q9H3F6 313 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 METTL14Q9HCE5 456 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 AGPAT3Q9NRZ7 376 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 TRMT13Q9NUP7 481 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 IFNKQ9P0W0 207 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ARHGAP28Q9P2N2 729 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 ARMCX3Q9UH62 379 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 CDY2AQ9Y6F7 541 aa11.65□□□□□ -0.54
TNFRSF1A-211ENST00000538363 GOLGA8IPA6NC78 632 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GOLGA8JA6NMD2 632 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ACKR2O00590 384 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 KIAA0391O15091 583 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PQBP1O60828 265 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CSDE1O75534 798 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TPM1P09493 284 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GARTP22102 1010 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NFX1Q12986 1120 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 BFSP2Q13515 415 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MYBPC2Q14324 1141 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NCAPHQ15003 741 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TCP11X2Q5H9J9 407 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 DCAF17Q5H9S7 520 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZPBP2Q6X784 338 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SERINC5Q86VE9 423 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ANKLE1Q8NAG6 615 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FIZ1Q96SL8 496 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 DUSP9Q99956 384 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TRPV6Q9H1D0 765 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 C11orf49Q9H6J7 331 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 KIAA1586Q9HCI6 787 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TAB2Q9NYJ8 693 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 HSPBP1Q9NZL4 362 aa11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 AGO2Q9UKV8 859 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.64□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ADGRA3Q8IWK6 1321 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TRIP12Q14669 1992 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZNF233A6NK53 670 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ANKRD63C9JTQ0 380 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TGFB1I1O43294 461 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 STX10O60499 249 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 RPS6KA5O75582 802 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TOM1L1O75674 476 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PPP1R37O75864 691 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ADCY5O95622 1261 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 DARSP14868 501 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZSCAN20P17040 1043 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 IBSPP21815 317 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 EIF4BP23588 611 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GJA8P48165 433 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ADAM17P78536 824 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PCBP1Q15365 356 aaKnown RBP eCLIP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ZNF568Q3ZCX4 644 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CDCA2Q69YH5 1023 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FOXR2Q6PJQ5 311 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SLC39A5Q6ZMH5 540 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NECAB2Q7Z6G3 386 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GPD1LQ8N335 351 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 LINC01465Q8N7H1 131 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SAAL1Q96ER3 474 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PRIMPOLQ96LW4 560 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FAM213AQ9BRX8 229 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TUBGCP2Q9BSJ2 902 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 STRA6Q9BX79 667 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NFKBIZQ9BYH8 718 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ATP11BQ9Y2G3 1177 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 USP20Q9Y2K6 914 aa11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 R3HCC1Q9Y3T6 440 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-211ENST00000538363 GPR182O15218 404 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SLC16A3O15427 465 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 FGFR4P22455 802 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 AXLP30530 894 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 HOXD13P35453 343 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 COPB1P53618 953 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 UBXN1Q04323 297 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PPP2R3AQ06190 1150 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CETN1Q12798 172 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 HIC1Q14526 733 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 SNX17Q15036 470 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 KRT31Q15323 416 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 KYAT1Q16773 422 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 CDKAL1Q5VV42 579 aa11.62□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NOTUMQ6P988 496 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms