RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-208	ENST00000538021	LTB4R2	Q9NPC1	389 aa		12.53	□□□□□ -0.4
CLPB-208	ENST00000538021	RBM28	Q9NW13	759 aa	Known RBP	12.53	□□□□□ -0.4
CLPB-208	ENST00000538021	BARHL2	Q9NY43	387 aa		12.53	□□□□□ -0.4
CLPB-208	ENST00000538021	RAB23	Q9ULC3	237 aa		12.53	□□□□□ -0.4
CLPB-208	ENST00000538021	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.53	□□□□□ -0.4
CLPB-208	ENST00000538021	PATJ	Q8NI35	1801 aa		12.53	□□□□□ -0.4
CLPB-208	ENST00000538021	MYH15	Q9Y2K3	1946 aa		12.52	□□□□□ -0.4
CLPB-208	ENST00000538021	BAHCC1	Q9P281	2608 aa		12.52	□□□□□ -0.4
CLPB-208	ENST00000538021	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	TMEM150B	A6NC51	233 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	hCG_1984214	I3L0E3	225 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	PFKP	Q01813	784 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	DSG1	Q02413	1049 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	TARBP2	Q15633	366 aa	Known RBP	12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	MTSS1L	Q765P7	747 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	GRASP	Q7Z6J2	395 aa	Predicted RBP	12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	ZNF713	Q8N859	430 aa	Predicted RBP	12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	NETO1	Q8TDF5	533 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	CRYGN	Q8WXF5	182 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	AGPAT5	Q9NUQ2	364 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	CDH7	Q9ULB5	785 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	CNTNAP2	Q9UHC6	1331 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021	WDR81	Q562E7	1941 aa		12.52	□□□□□ -0.41
CLPB-208	ENST00000538021		F8W810	466 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	SLC30A4	O14863	429 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	NCAM2	O15394	837 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	SGSM2	O43147	1006 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	ZMYND10	O75800	440 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	RPL17	P18621	184 aa	Known RBP	12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	TARS	P26639	723 aa	Known RBP	12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	NTHL1	P78549	312 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	DMWD	Q09019	674 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	RTN1	Q16799	776 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	TTC22	Q5TAA0	569 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	MRPL10	Q7Z7H8	261 aa	Known RBP	12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	COLGALT2	Q8IYK4	626 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	RNF168	Q8IYW5	571 aa	Predicted RBP	12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	NELL1	Q92832	810 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	POLI	Q9UNA4	740 aa		12.51	□□□□□ -0.41
CLPB-208	ENST00000538021	MTCL1	Q9Y4B5	1905 aa	Known RBP	12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	ASPM	Q8IZT6	3477 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	IGKV6-21	A0A0C4DH24	114 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	ADAMTS3	O15072	1205 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	GAS7	O60861	476 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	NR1I2	O75469	434 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	PAPLN	O95428	1278 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	ITGA4	P13612	1032 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	SFN	P31947	248 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	JAK3	P52333	1124 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	COL9A2	Q14055	689 aa	Predicted RBP	12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	XKR3	Q5GH77	459 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	PRR23B	Q6ZRT6	265 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	TPRG1	Q6ZUI0	275 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	SGMS1	Q86VZ5	419 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	EXOC6	Q8TAG9	804 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	FGF13	Q92913	245 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	KXD1	Q9BQD3	176 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	PHF20	Q9BVI0	1012 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	TEKT3	Q9BXF9	490 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	NIFK	Q9BYG3	293 aa	Known RBP	12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	UNC45A	Q9H3U1	944 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	CHST7	Q9NS84	486 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	DOCK6	Q96HP0	2047 aa		12.5	□□□□□ -0.41
CLPB-208	ENST00000538021	DDX11L8	A8MPP1	907 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	MSH4	O15457	936 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	EFEMP2	O95967	443 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	C1R	P00736	705 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	NCL	P19338	710 aa	Known RBP	12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	FUT2	Q10981	343 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	MTAP	Q13126	283 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	USP41	Q3LFD5	358 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	UBXN11	Q5T124	520 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	LIN9	Q5TKA1	542 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	LRCH2	Q5VUJ6	765 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	LILRA6	Q6PI73	481 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	APOA5	Q6Q788	366 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	MIER3	Q7Z3K6	550 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	REXO1	Q8N1G1	1221 aa	Known RBP	12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	GJA10	Q969M2	543 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	CLDN23	Q96B33	292 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	LENG9	Q96B70	501 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	CEP89	Q96ST8	783 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	GAD1	Q99259	594 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	NELL2	Q99435	816 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	COLEC11	Q9BWP8	271 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	GPR62	Q9BZJ7	368 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	IFT122	Q9HBG6	1241 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	C6orf50	Q9HD87	102 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	UBN1	Q9NPG3	1134 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	PRMT8	Q9NR22	394 aa	Predicted RBP	12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	MIOS	Q9NXC5	875 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	ANGPTL2	Q9UKU9	493 aa		12.49	□□□□□ -0.41
CLPB-208	ENST00000538021	ARL5C	A6NH57	179 aa		12.48	□□□□□ -0.41
CLPB-208	ENST00000538021	CCL16	O15467	120 aa		12.48	□□□□□ -0.41
CLPB-208	ENST00000538021	ZBTB43	O43298	467 aa		12.48	□□□□□ -0.41
CLPB-208	ENST00000538021	MAF	O75444	373 aa	Predicted RBP	12.48	□□□□□ -0.41

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