RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 ARHGEF15O94989 841 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 ITGA4P13612 1032 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 SMTNP53814 917 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 PLCB3Q01970 1234 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 NOMO2Q5JPE7 1267 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 MRPL10Q7Z7H8 261 aaKnown RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 COLGALT1Q8NBJ5 622 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 MICAL1Q8TDZ2 1067 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 CSRNP2Q9H175 543 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 BHMT2Q9H2M3 363 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 NGRNQ9NPE2 291 aaKnown RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 TYW1Q9NV66 732 aaKnown RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 SPG21Q9NZD8 308 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 PCDHB2Q9Y5E7 798 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 SIP14410 1827 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 VWA3AA6NCI4 1184 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 EPOPA6NHQ4 379 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 GLRA2P23416 452 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 DMP1Q13316 513 aaPredicted RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 CAPSQ13938 189 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 FAM187BQ17R55 369 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 KLHL23Q8NBE8 558 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 ZNF397Q8NF99 534 aaPredicted RBP11.72□□□□□ -0.53
TCF4-206ENST00000537856 CASD1Q96PB1 797 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 SSX2IPQ9Y2D8 614 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 PAXBP1Q9Y5B6 917 aa11.72□□□□□ -0.53
TCF4-206ENST00000537856 GOLGA6L6A8MZA4 724 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 ZBTB39O15060 712 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 ADCY5O95622 1261 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 FGFR1P11362 822 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 FGFR4P22455 802 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 HYIQ5T013 277 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 CABP7Q86V35 215 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 PABPC5Q96DU9 382 aaKnown RBP11.71□□□□□ -0.53
TCF4-206ENST00000537856 TMEM169Q96HH4 297 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 TMEM175Q9BSA9 504 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 RSAD1Q9HA92 442 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 USP25Q9UHP3 1055 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 GIT1Q9Y2X7 761 aa11.71□□□□□ -0.53
TCF4-206ENST00000537856 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.71□□□□□ -0.53
TCF4-206ENST00000537856 PTPRSQ13332 1948 aa11.71□□□□□ -0.54
TCF4-206ENST00000537856 DLL1O00548 723 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 STX6O43752 255 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 FGF18O76093 207 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 ALDH2P05091 517 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 SYT1P21579 422 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 MBTD1Q05BQ5 628 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 PRPF4BQ13523 1007 aaKnown RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 ZRSR1Q15695 479 aaKnown RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 DCAF4L1Q3SXM0 396 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 CDCA2Q69YH5 1023 aaPredicted RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 ELMSAN1Q6PJG2 1045 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 KCNT2Q6UVM3 1135 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 MAEAQ7L5Y9 396 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 ASAP3Q8TDY4 903 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 POF1BQ8WVV4 589 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 MRPS27Q92552 414 aaKnown RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 TLR9Q9NR96 1032 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 RANBP2P49792 3224 aaKnown RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 K7ERI5 159 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 ACKR2O00590 384 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 TSPAN1O60635 241 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 STRN3Q13033 797 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 SF3A1Q15459 793 aaKnown RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 SPPL3Q8TCT6 385 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 TMEM134Q9H6X4 195 aa11.7□□□□□ -0.54
TCF4-206ENST00000537856 UBE2ZQ9H832 354 aaPredicted RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 LARSQ9P2J5 1176 aaKnown RBP11.7□□□□□ -0.54
TCF4-206ENST00000537856 A0A1B0GUA9 196 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 GRM6O15303 877 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 CSDE1O75534 798 aaKnown RBP11.69□□□□□ -0.54
TCF4-206ENST00000537856 SSBP05455 408 aaKnown RBP eCLIP11.69□□□□□ -0.54
TCF4-206ENST00000537856 ITGB1P05556 798 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 PRKCBP05771 671 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 SYT2Q8N9I0 419 aaPredicted RBP11.69□□□□□ -0.54
TCF4-206ENST00000537856 RPS6KC1Q96S38 1066 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 LRRC27Q9C0I9 530 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 FZD8Q9H461 694 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 CWH43Q9H720 699 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
TCF4-206ENST00000537856 CCDC169A6NNP5 214 aa11.68□□□□□ -0.54
TCF4-206ENST00000537856 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
TCF4-206ENST00000537856 HOXA11P31270 313 aaPredicted RBP11.68□□□□□ -0.54
TCF4-206ENST00000537856 SMC1AQ14683 1233 aaKnown RBP11.68□□□□□ -0.54
TCF4-206ENST00000537856 LEXMQ3ZCV2 418 aa11.68□□□□□ -0.54
TCF4-206ENST00000537856 TCEAL5Q5H9L2 206 aa11.68□□□□□ -0.54
TCF4-206ENST00000537856 RASSF4Q9H2L5 321 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms