RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SAMD3Q8N6K7 520 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 MCUR1Q96AQ8 359 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 GPRC5DQ9NZD1 345 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 RASGRF2O14827 1237 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 WDR46O15213 610 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 NUDT17P0C025 328 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 TSPY3P0CV98 308 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 TSPY8P0CW00 308 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 COG7P83436 770 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 ARHGAP24Q8N264 748 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 RIBC1Q8N443 379 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 ANKRD42Q8N9B4 389 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 DQX1Q8TE96 717 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 NMD3Q96D46 503 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 ERP27Q96DN0 273 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 GPCPD1Q9NPB8 672 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
CLSTN3-207ENST00000537408 CAPN9O14815 690 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 MMP1P03956 469 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 PPP2R5EQ16537 467 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 ZNF449Q6P9G9 518 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 TRIM50Q86XT4 487 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 SREK1Q8WXA9 508 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 STAMQ92783 540 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 INPP4AQ96PE3 977 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 BHMT2Q9H2M3 363 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 MMRN2Q9H8L6 949 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 TBC1D7Q9P0N9 293 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 ZNF212Q9UDV6 495 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 SEC63Q9UGP8 760 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 PLAGL2Q9UPG8 496 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 HTR3EA5X5Y0 456 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 TMEM110-MUSTN1A8MSY1 372 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 ATP9BO43861 1147 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 ENTPD5O75356 428 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 CSF1RP07333 972 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 TARSP26639 723 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 EPS15P42566 896 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 CDR2Q01850 454 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 BTNL9Q6UXG8 535 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 B3GNT6Q6ZMB0 384 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 TGS1Q96RS0 853 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 TRIM31Q9BZY9 425 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 PABPC3Q9H361 631 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 THEGQ9P2T0 379 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 HAO1Q9UJM8 370 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 ZNF263O14978 683 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 SLC9C1Q4G0N8 1177 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 IFIT1BQ5T764 474 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 RRAGAQ7L523 313 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 MB21D2Q8IYB1 491 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 DDX12PQ92771 950 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 MTMR8Q96EF0 704 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 EPSTI1Q96J88 318 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 AGBL1Q96MI9 1066 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 CSRNP1Q96S65 589 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 POLR3CQ9BUI4 534 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 TBC1D10AQ9BXI6 508 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
CLSTN3-207ENST00000537408 BTDP43251 543 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 ARPC4P59998 168 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 LRRC14Q15048 493 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 FAM47EQ6ZV65 393 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 USP49Q70CQ1 688 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 CCDC84Q86UT8 332 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 PIP4K2CQ8TBX8 421 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 TRIM11Q96F44 468 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 BTAF1O14981 1849 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 STK36Q9NRP7 1315 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 COL18A1P39060 1754 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 PLEKP08567 350 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 PORP16435 677 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 EPHB2P29323 1055 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 TMED10P49755 219 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 DSG1Q02413 1049 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 ACVR2BQ13705 512 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 FAM133AQ8N9E0 248 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 TUBB6Q9BUF5 446 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 AP1M1Q9BXS5 423 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 DRC3Q9H069 523 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 MYLK2Q9H1R3 596 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 LCA5LO95447 670 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 PYGMP11217 842 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 PDE6AP16499 860 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 FUT4P22083 530 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 SYDE2Q5VT97 1194 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 VPS52Q8N1B4 723 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 DEPTORQ8TB45 409 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 DDX50Q9BQ39 737 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 PITPNM3Q9BZ71 974 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 DDX47Q9H0S4 455 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 POLLQ9UGP5 575 aa11.61□□□□□ -0.55
CLSTN3-207ENST00000537408 SPECC1L-ADORA2AF8WAN1 911 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 NFKBIEO00221 500 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 RXRAP19793 462 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 HOXD10P28358 340 aa11.6□□□□□ -0.55
CLSTN3-207ENST00000537408 ECHS1P30084 290 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms