RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 CDC25AP30304 524 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 ZAP70P43403 619 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 TUBA3CQ13748 450 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 NECTIN1Q15223 517 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 NOP9Q86U38 636 aaKnown RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 CLVS1Q8IUQ0 354 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 CCDC117Q8IWD4 279 aaPredicted RBP12.5□□□□□ -0.41
POLR1B-216ENST00000537335 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 HEMGNQ9BXL5 484 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 HMG20AQ9NP66 347 aa12.5□□□□□ -0.41
POLR1B-216ENST00000537335 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 GOLGA8SH3BPF8 625 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 NR5A1Q13285 461 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 SYCP2LQ5T4T6 812 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ARMC3Q5W041 872 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 BTN2A1Q7KYR7 527 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 MARK2Q7KZI7 788 aaKnown RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 UBE2Q1Q7Z7E8 422 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 KCTD6Q8NC69 237 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 COPG2Q9UBF2 871 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 HEY2Q9UBP5 337 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 A8MXQ7 604 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 IDH3BO43837 385 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ITIH2P19823 946 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 CAPRIN1Q14444 709 aaKnown RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF618Q5T7W0 954 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 SYDE1Q6ZW31 735 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 SLFN12Q8IYM2 578 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 SKA1Q96BD8 255 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ANKZF1Q9H8Y5 726 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 METTL5Q9NRN9 209 aaKnown RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF446Q9NWS9 450 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF212Q9UDV6 495 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 HBS1LQ9Y450 684 aaKnown RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 TNKSO95271 1327 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 MED23Q9ULK4 1368 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 CIITAP33076 1130 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 SLC1A4P43007 532 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 KRT17Q04695 432 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ITGADQ13349 1161 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 SLC29A2Q14542 456 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 BARGINQ6ZT62 677 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 STX19Q8N4C7 294 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 RRN3Q9NYV6 651 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 MARCOQ9UEW3 520 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 STK39Q9UEW8 545 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 RGS5O15539 181 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 RTN3O95197 1032 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 LRPAP1P30533 357 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 GPS1Q13098 491 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ARMC4Q5T2S8 1044 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 WNT8AQ9H1J5 351 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 PSMC3IPQ9P2W1 217 aaPredicted RBP12.49□□□□□ -0.41
POLR1B-216ENST00000537335 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 BICRAQ9NZM4 1560 aa12.49□□□□□ -0.41
POLR1B-216ENST00000537335 PIK3R2O00459 728 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 STX7O15400 261 aaKnown RBP12.48□□□□□ -0.41
POLR1B-216ENST00000537335 SEMA3DO95025 777 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 NLRP11P59045 1033 aaKnown RBP12.48□□□□□ -0.41
POLR1B-216ENST00000537335 TUBA1BP68363 451 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 IFRD2Q12894 506 aaPredicted RBP12.48□□□□□ -0.41
POLR1B-216ENST00000537335 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 TUBA1AQ71U36 451 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 GIPC3Q8TF64 312 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 TRIM10Q9UDY6 481 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 COL17A1Q9UMD9 1497 aaPredicted RBP12.48□□□□□ -0.41
POLR1B-216ENST00000537335 TRIM49BA6NDI0 452 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 MAP2K7O14733 419 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 SNPHO15079 494 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 PYGLP06737 847 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 IFNAR1P17181 557 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 PEX5P50542 639 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
POLR1B-216ENST00000537335 MAPK11Q15759 364 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 THOC7Q6I9Y2 204 aaKnown RBP12.48□□□□□ -0.41
POLR1B-216ENST00000537335 ZNF507Q8TCN5 953 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 KIAA1024Q9UPX6 916 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 PCDHB4Q9Y5E5 795 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 LOC100653049A0A140TA62 436 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 ADCY6O43306 1168 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 FOXO3O43524 673 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 KRT34O76011 436 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 USP1O94782 785 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 ATXN3P54252 364 aaPredicted RBP12.48□□□□□ -0.41
POLR1B-216ENST00000537335 CCDC142Q17RM4 750 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 KLHL12Q53G59 568 aa12.48□□□□□ -0.41
POLR1B-216ENST00000537335 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms