RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PCYOX1Q9UHG3 505 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 ATP8A1Q9Y2Q0 1164 aa17.28■□□□□ 0.36
CHMP1A-202ENST00000535997 PSME4Q14997 1843 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 GMNCA6NCL1 334 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 E7EVH7 732 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 KIAA0754O94854 1291 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 USP8P40818 1118 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 PEX5P50542 639 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 NCKAP1LP55160 1127 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 JAMLQ86YT9 394 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 MTMR14Q8NCE2 650 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 PLEKHO2Q8TD55 490 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 EPS8L1Q8TE68 723 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 WNT8AQ9H1J5 351 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 NOCTQ9UK39 431 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 NOVA2Q9UNW9 492 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 EXOC7Q9UPT5 735 aa17.27■□□□□ 0.36
CHMP1A-202ENST00000535997 KIAA0391O15091 583 aaKnown RBP17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 PHF2O75151 1096 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 SGPL1O95470 568 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 CTNNA2P26232 953 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 LIG3P49916 1009 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 MFAP3P55082 362 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 IFFO1Q0D2I5 559 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 KRT71Q3SY84 523 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 CDAN1Q8IWY9 1227 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 OTUD6BQ8N6M0 293 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 PCDHB18PQ96TA0 734 aa17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 PABPC3Q9H361 631 aaKnown RBP17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 PPANQ9NQ55 473 aaKnown RBP17.27■□□□□ 0.35
CHMP1A-202ENST00000535997 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 NUDT17P0C025 328 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 CHRNB2P17787 502 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 COMTP21964 271 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 COPB2P35606 906 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PEX3P56589 373 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PSMC5P62195 406 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PRELID2Q8N945 189 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 LPAR1Q92633 364 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 KRT35Q92764 455 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PGAP2Q9UHJ9 254 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 COQ4Q9Y3A0 265 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 WDR46O15213 610 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 SLC16A4O15374 487 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PAEPP09466 180 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PTGIRP43119 386 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 SMTNP53814 917 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 RASA3Q14644 834 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 MESDQ14696 234 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 SNRNP35Q16560 246 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 KRT39Q6A163 491 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 NOP9Q86U38 636 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 ZSWIM2Q8NEG5 633 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 SYTL5Q8TDW5 730 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 SHC3Q92529 594 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 MAGOHBQ96A72 148 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PSMD1Q99460 953 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 ZNF341Q9BYN7 854 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 ANKEF1Q9NU02 776 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 PARP2Q9UGN5 583 aa17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 ZBTB12Q9Y330 459 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-202ENST00000535997 ASTN2O75129 1339 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 PMS2P54278 862 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 PLTPP55058 493 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 MAGOHP61326 146 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 SPP2Q13103 211 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 BYSLQ13895 437 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 HOOK3Q86VS8 718 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 PPM1KQ8N3J5 372 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 KAT5Q92993 513 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 CD101Q93033 1021 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 KREMEN1Q96MU8 473 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 CNOT10Q9H9A5 744 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 TRPC6Q9Y210 931 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 SNX24Q9Y343 169 aa17.25■□□□□ 0.35
CHMP1A-202ENST00000535997 CYP26A1O43174 497 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 ALAS1P13196 640 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 ADSSP30520 456 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 SFNP31947 248 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 CDR1P51861 262 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 JAK3P52333 1124 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 KCTD19Q17RG1 926 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 SEL1L2Q5TEA6 688 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 ZNF746Q6NUN9 644 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 CPXCR1Q8N123 301 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 PARD3BQ8TEW8 1205 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 TLCD1Q96CP7 247 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 HVCN1Q96D96 273 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 C18orf8Q96DM3 657 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 RUNDC3BQ96NL0 473 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 CNOT7Q9UIV1 285 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 TBX20Q9UMR3 447 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 BACH1O14867 736 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 CYP1A2P05177 515 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 ADRB2P07550 413 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 TMOD1P28289 359 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms