RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 DBR1Q9UK59 544 aaKnown RBP17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 FAN1Q9Y2M0 1017 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 IRAK3Q9Y616 596 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 LRRIQ4A6NIV6 560 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 B4GALT3O60512 393 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 ARF4P18085 180 aaPredicted RBP17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 RPA1P27694 616 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 ITIH3Q06033 890 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 HAUS3Q68CZ6 603 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 EDAQ92838 391 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 NECTIN4Q96NY8 510 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 GAD1Q99259 594 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 KIF2CQ99661 725 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 ADAM7Q9H2U9 754 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 DZANK1Q9NVP4 752 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 TRIOO75962 3097 aa17.95■□□□□ 0.46
CLSTN3-204ENST00000535313 ARHGEF35A5YM69 484 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 ARL5CA6NH57 179 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 MLH1P40692 756 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 AMHR2Q16671 573 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 POTEGQ6S5H5 508 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 PPFIBP1Q86W92 1011 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 APOL6Q9BWW8 343 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 EMILIN2Q9BXX0 1053 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 RNF39Q9H2S5 420 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 GPRC5CQ9NQ84 441 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 HES2Q9Y543 173 aa17.94■□□□□ 0.46
CLSTN3-204ENST00000535313 NRP1O14786 923 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 INPPL1O15357 1258 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 B4GALT5O43286 388 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 NR1I2O75469 434 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 SSBP05455 408 aaKnown RBP eCLIP17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 OR1G1P47890 313 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 PTPN14Q15678 1187 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 SLC27A1Q6PCB7 646 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 PADI6Q6TGC4 694 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 VN1R3Q9BXE9 311 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 PRMT7Q9NVM4 692 aaPredicted RBP17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 GIT1Q9Y2X7 761 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 PRG3Q9Y2Y8 225 aaPredicted RBP17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 NR2E1Q9Y466 385 aa17.93■□□□□ 0.46
CLSTN3-204ENST00000535313 A0A1B0GUA9 196 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 NPTXRO95502 500 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 MUTP22033 750 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 CCT6AP40227 531 aaKnown RBP17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 MTHFRP42898 656 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 RABEP1Q15276 862 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 COLGALT2Q8IYK4 626 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 PRIMPOLQ96LW4 560 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 MFSD14AQ96MC6 490 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 RIPOR3Q96MK2 946 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 C2orf40Q9H1Z8 148 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 NXF3Q9H4D5 531 aaKnown RBP17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 TSHZ2Q9NRE2 1034 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 MRPL17Q9NRX2 175 aaKnown RBP17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 SSX2IPQ9Y2D8 614 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 KIF3AQ9Y496 699 aa17.92■□□□□ 0.46
CLSTN3-204ENST00000535313 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 ST18O60284 1047 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 URODP06132 367 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 EPCAMP16422 314 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 CYP11B2P19099 503 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 SP100P23497 879 aaPredicted RBP17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 U2AF2P26368 475 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 KLRC2P26717 231 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 SCNN1GP51170 649 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 ZXDAP98168 799 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 TMEM132AQ24JP5 1023 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 RARS2Q5T160 578 aaKnown RBP17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 CDCA2Q69YH5 1023 aaPredicted RBP17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 HFE2Q6ZVN8 426 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 CABP7Q86V35 215 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 CDR2LQ86X02 465 aaPredicted RBP17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 SLC22A17Q8WUG5 538 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 ZFP42Q96MM3 310 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 LRWD1Q9UFC0 647 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 PARP2Q9UGN5 583 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 GTF3C3Q9Y5Q9 886 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 STK24Q9Y6E0 443 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 MUC6Q6W4X9 2439 aa17.91■□□□□ 0.46
CLSTN3-204ENST00000535313 SOD2P04179 222 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 AKAP5P24588 427 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 DSC1Q08554 894 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 NBR1Q14596 966 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 PPP2R5AQ15172 486 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 MAPK6Q16659 721 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 ATAT1Q5SQI0 421 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 TRIM67Q6ZTA4 783 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 ZBTB33Q86T24 672 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 C12orf76Q8N812 135 aaPredicted RBP17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 C4orf32Q8N8J7 132 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 DEPTORQ8TB45 409 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 KLHL5Q96PQ7 755 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 HERC2P3Q9BVR0 1158 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 COLEC11Q9BWP8 271 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 FZD8Q9H461 694 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms