RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 USP46P62068 366 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 PRR20EP86478 221 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 PRR20CP86479 221 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 PRR20DP86480 221 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 PRR20BP86481 221 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 PRR20AP86496 221 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 FZD5Q13467 585 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 MTMR1Q13613 665 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 CCDC6Q16204 474 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 CCDC178Q5BJE1 867 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 PLPPR4Q7Z2D5 763 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 IQCA1Q86XH1 822 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 ENAHQ8N8S7 591 aaPredicted RBP7.37□□□□□ -1.23
CD44-237ENST00000534082 NELL2Q99435 816 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 USB1Q9BQ65 265 aaKnown RBP7.37□□□□□ -1.23
CD44-237ENST00000534082 LSM14BQ9BX40 385 aaKnown RBP7.37□□□□□ -1.23
CD44-237ENST00000534082 CHRDQ9H2X0 955 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 RNF41Q9H4P4 317 aaPredicted RBP7.37□□□□□ -1.23
CD44-237ENST00000534082 JPH1Q9HDC5 661 aaPredicted RBP7.37□□□□□ -1.23
CD44-237ENST00000534082 A0A0U1RQF3 1178 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 CYSRT1A8MQ03 144 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 TEX28O15482 410 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 GPR32O75388 356 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 CD2BP2O95400 341 aaKnown RBP7.36□□□□□ -1.23
CD44-237ENST00000534082 PAPLNO95428 1278 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 TOP3BO95985 862 aaKnown RBP7.36□□□□□ -1.23
CD44-237ENST00000534082 FSHRP23945 695 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 RPIAP49247 311 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 NOVA1P51513 510 aaKnown RBP7.36□□□□□ -1.23
CD44-237ENST00000534082 CCR3P51677 355 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 STAT5BP51692 787 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 RNASELQ05823 741 aaKnown RBP7.36□□□□□ -1.23
CD44-237ENST00000534082 ADCY1Q08828 1119 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 SLC35G1Q2M3R5 365 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 ZNF852Q6ZMS4 543 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 MTSS1LQ765P7 747 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 PI4K2BQ8TCG2 481 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 RSPH1Q8WYR4 309 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 PIGSQ96S52 555 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 ZSCAN10Q96SZ4 725 aaPredicted RBP7.36□□□□□ -1.23
CD44-237ENST00000534082 KXD1Q9BQD3 176 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 IER2Q9BTL4 223 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 REPIN1Q9BWE0 567 aaKnown RBP7.36□□□□□ -1.23
CD44-237ENST00000534082 NT5C3AQ9H0P0 336 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 GBP3Q9H0R5 595 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 NRDE2Q9H7Z3 1164 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 TBC1D13Q9NVG8 400 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 ZDHHC7Q9NXF8 308 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 SLC9A2Q9UBY0 812 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 DNAJB4Q9UDY4 337 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 STK39Q9UEW8 545 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 CDH7Q9ULB5 785 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 INPP5FQ9Y2H2 1132 aa7.36□□□□□ -1.23
CD44-237ENST00000534082 MRPS17Q9Y2R5 130 aaKnown RBP7.36□□□□□ -1.23
CD44-237ENST00000534082 COL1A2P08123 1366 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 CHURC1-FNTBB4DL54 471 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 GIPC1O14908 333 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 HBP1O60381 514 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 B4GALT3O60512 393 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 ZMYND10O75800 440 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 C22orf31O95567 290 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 SPATA31D3P0C874 917 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 CNR2P34972 360 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 FNTBP49356 437 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 SLC26A2P50443 739 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 ACTR2P61160 394 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 SATB1Q01826 763 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 NOMO2Q5JPE7 1267 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 ZNF787Q6DD87 383 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 USP17L6PQ6QN14 398 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 GLB1LQ6UWU2 654 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 SPATA31D4Q6ZUB0 917 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 CEP68Q76N32 757 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 PDZD3Q86UT5 571 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 SMARCC2Q8TAQ2 1214 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 RPS6KC1Q96S38 1066 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 PHF20Q9BVI0 1012 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 HERC2P3Q9BVR0 1158 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 SCNM1Q9BWG6 230 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 ARRDC1-AS1Q9H2J1 176 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 ZBTB40Q9NUA8 1239 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 ANKFY1Q9P2R3 1169 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 MAD2L2Q9UI95 211 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 NDRG2Q9UN36 371 aaKnown RBP7.35□□□□□ -1.23
CD44-237ENST00000534082 RALGAPA1Q6GYQ0 2036 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 GREB1Q4ZG55 1949 aa7.35□□□□□ -1.23
CD44-237ENST00000534082 TTC41PQ6P2S7 1318 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 PNMA6FA0A0J9YX94 578 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 SHISA7A6NL88 538 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 DGAT1O75907 488 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 SOD2P04179 222 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 ZNF806P0C7X5 589 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 FGFR4P22455 802 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 EIF4BP23588 611 aaKnown RBP7.34□□□□□ -1.23
CD44-237ENST00000534082 NT5C2P49902 561 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 CLCN3P51790 818 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 LONRF3Q496Y0 759 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 ZNF484Q5JVG2 852 aa7.34□□□□□ -1.23
CD44-237ENST00000534082 RNF43Q68DV7 783 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms