RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 CAMK4Q16566 473 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 ZC2HC1CQ53FD0 456 aaPredicted RBP17.09■□□□□ 0.33
CTTN-215ENST00000533931 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 PHOSPHO2Q8TCD6 241 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 ADAM2Q99965 735 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 FGFBP2Q9BYJ0 223 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 PTPRHQ9HD43 1115 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 MAN1B1Q9UKM7 699 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 STYXL1Q9Y6J8 313 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 MYH11P35749 1972 aa17.09■□□□□ 0.33
CTTN-215ENST00000533931 A0A1W2PPC1 479 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 C9IYK1 514 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 ENPP3O14638 875 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 KIAA0391O15091 583 aaKnown RBP17.08■□□□□ 0.32
CTTN-215ENST00000533931 EOMESO95936 686 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 AMHP03971 560 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 EDN1P05305 212 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 ACRP10323 421 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 MCF2P10911 925 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 LIG4P49917 911 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 MCL1Q07820 350 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 NFKBIBQ15653 356 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 KYAT1Q16773 422 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 TCTN1Q2MV58 587 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 TWF2Q6IBS0 349 aaKnown RBP17.08■□□□□ 0.32
CTTN-215ENST00000533931 FOXR2Q6PJQ5 311 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 MPZL3Q6UWV2 235 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 HACE1Q8IYU2 909 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 LINC01599Q8WXQ3 324 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 BICD1Q96G01 975 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 SLC9A7Q96T83 725 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 TARS2Q9BW92 718 aaKnown RBP17.08■□□□□ 0.32
CTTN-215ENST00000533931 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
CTTN-215ENST00000533931 GBP3Q9H0R5 595 aa17.08■□□□□ 0.32
CTTN-215ENST00000533931 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.07■□□□□ 0.32
CTTN-215ENST00000533931 ABLIM1O14639 778 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 MGEA5O60502 916 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 LETM1O95202 739 aaPredicted RBP17.07■□□□□ 0.32
CTTN-215ENST00000533931 GARTP22102 1010 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 KCNJ6P48051 423 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 WDR5P61964 334 aaKnown RBP17.07■□□□□ 0.32
CTTN-215ENST00000533931 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
CTTN-215ENST00000533931 STIM1Q13586 685 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 KNOP1Q1ED39 458 aaKnown RBP17.07■□□□□ 0.32
CTTN-215ENST00000533931 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 UBXN11Q5T124 520 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 HS2ST1Q7LGA3 356 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 MRPL10Q7Z7H8 261 aaKnown RBP17.07■□□□□ 0.32
CTTN-215ENST00000533931 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
CTTN-215ENST00000533931 NPAS4Q8IUM7 802 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 C12orf56Q8IXR9 622 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 SYCP3Q8IZU3 236 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 GLIS3Q8NEA6 775 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 FAM105AQ9NUU6 356 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 TMEM161AQ9NX61 479 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 SCN5AQ14524 2016 aa17.07■□□□□ 0.32
CTTN-215ENST00000533931 A0A0B4J269 797 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 PDXKO00764 312 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 CLDN3O15551 220 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 HOXA2O43364 376 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
CTTN-215ENST00000533931 STAG3L1P0CL83 205 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 HOXD13P35453 343 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 MYBPC2Q14324 1141 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 ZNF568Q3ZCX4 644 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 CT47A1Q5JQC4 288 aaPredicted RBP17.06■□□□□ 0.32
CTTN-215ENST00000533931 OTOP2Q7RTS6 562 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 ECHDC2Q86YB7 292 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 CRIPAKQ8N1N5 446 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 MLKLQ8NB16 471 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 PGBD4Q96DM1 585 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 UBN1Q9NPG3 1134 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 TYW1Q9NV66 732 aaKnown RBP17.06■□□□□ 0.32
CTTN-215ENST00000533931 TMEM63CQ9P1W3 806 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 PCDHB2Q9Y5E7 798 aa17.06■□□□□ 0.32
CTTN-215ENST00000533931 TTLL13PA6NNM8 815 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 KCNA1Q09470 495 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 NOLC1Q14978 699 aaKnown RBP eCLIP17.05■□□□□ 0.32
CTTN-215ENST00000533931 NFIL3Q16649 462 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 PRPF38BQ5VTL8 546 aaKnown RBP17.05■□□□□ 0.32
CTTN-215ENST00000533931 EEF1DP3Q658K8 133 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 ZNF598Q86UK7 904 aaKnown RBP17.05■□□□□ 0.32
CTTN-215ENST00000533931 ADSSL1Q8N142 457 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 ERCC4Q92889 916 aaPredicted RBP17.05■□□□□ 0.32
CTTN-215ENST00000533931 TOP1MTQ969P6 601 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
CTTN-215ENST00000533931 TRIM6Q9C030 488 aaPredicted RBP17.05■□□□□ 0.32
CTTN-215ENST00000533931 CDT1Q9H211 546 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 TRAF3IP3Q9Y228 551 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 GDAQ9Y2T3 454 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 SLC4A7Q9Y6M7 1214 aa17.05■□□□□ 0.32
CTTN-215ENST00000533931 CEP290O15078 2479 aa17.04■□□□□ 0.32
CTTN-215ENST00000533931 PSMA7O14818 248 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms