RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 SHISA7A6NL88 538 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 FAM170BA6NMN3 283 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 TGM5O43548 720 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 CALM1P0DP23 149 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 CALM2P0DP24 149 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 CALM3P0DP25 149 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 FZD5Q13467 585 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 SLC44A4Q53GD3 710 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 UBXN11Q5T124 520 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 PPP1R18Q6NYC8 613 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 LILRA6Q6PI73 481 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 MRPL10Q7Z7H8 261 aaKnown RBP13.85□□□□□ -0.19
SVIP-205ENST00000533774 GLYCTKQ8IVS8 523 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 COLGALT2Q8IYK4 626 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 SHDQ96IW2 340 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 CHAMP1Q96JM3 812 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 PIDD1Q9HB75 910 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 LTB4R2Q9NPC1 389 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 NRBP2Q9NSY0 501 aa13.85□□□□□ -0.19
SVIP-205ENST00000533774 RBM8AQ9Y5S9 174 aaKnown RBP13.85□□□□□ -0.19
SVIP-205ENST00000533774 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
SVIP-205ENST00000533774 COL4A2P08572 1712 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 GREB1Q4ZG55 1949 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 SGSM2O43147 1006 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 GAS2O43903 313 aaKnown RBP13.84□□□□□ -0.19
SVIP-205ENST00000533774 SKIP12755 728 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 RPL17P18621 184 aaKnown RBP13.84□□□□□ -0.19
SVIP-205ENST00000533774 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
SVIP-205ENST00000533774 TARSP26639 723 aaKnown RBP13.84□□□□□ -0.19
SVIP-205ENST00000533774 MCM5P33992 734 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 GLUD2P49448 558 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 RAB27AP51159 221 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 DSG1Q02413 1049 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 SPEM2Q0P670 501 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 COL9A2Q14055 689 aaPredicted RBP13.84□□□□□ -0.19
SVIP-205ENST00000533774 LPAL2Q16609 132 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 CATSPER4Q7RTX7 472 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 TMTC2Q8N394 836 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 URGCPQ8TCY9 931 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 HDAC7Q8WUI4 952 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 GJA10Q969M2 543 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 CLDN23Q96B33 292 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 BORCS6Q96GS4 357 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 TMEM87BQ96K49 555 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 OSBPL6Q9BZF3 934 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 RSAD1Q9HA92 442 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 DISC1Q9NRI5 854 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 MIOSQ9NXC5 875 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 BARHL2Q9NY43 387 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 SAMM50Q9Y512 469 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 SLC12A7Q9Y666 1083 aa13.84□□□□□ -0.19
SVIP-205ENST00000533774 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 WDR64B1ANS9 1081 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 HAX1O00165 279 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 SLC30A4O14863 429 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 TDGF1P13385 188 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 HOXB3P14651 431 aaPredicted RBP13.83□□□□□ -0.2
SVIP-205ENST00000533774 FSHRP23945 695 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.2
SVIP-205ENST00000533774 CLCN6P51797 869 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 MTERF2Q49AM1 385 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 PRR16Q569H4 304 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 TTC22Q5TAA0 569 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 GRASPQ7Z6J2 395 aaPredicted RBP13.83□□□□□ -0.2
SVIP-205ENST00000533774 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 TEX2Q8IWB9 1127 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 FAM193BQ96PV7 902 aaPredicted RBP13.83□□□□□ -0.2
SVIP-205ENST00000533774 PLEKHA4Q9H4M7 779 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 MINDY3Q9H8M7 445 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 IFT122Q9HBG6 1241 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 PRMT8Q9NR22 394 aaPredicted RBP13.83□□□□□ -0.2
SVIP-205ENST00000533774 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 ZDHHC7Q9NXF8 308 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 STK39Q9UEW8 545 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 TICRRQ7Z2Z1 1910 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 ARID2Q68CP9 1835 aa13.83□□□□□ -0.2
SVIP-205ENST00000533774 FASNP49327 2511 aaKnown RBP13.83□□□□□ -0.2
SVIP-205ENST00000533774 PDCD11Q14690 1871 aaKnown RBP13.82□□□□□ -0.2
SVIP-205ENST00000533774 TRIP11Q15643 1979 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 ZZEF1O43149 2961 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 TBC1D4O60343 1298 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 ZMYND10O75800 440 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 OR1G1P47890 313 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 PRKCQQ04759 706 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 DSC1Q08554 894 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 POTEHQ6S545 545 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 SGMS1Q86VZ5 419 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 SMG8Q8ND04 991 aaKnown RBP13.82□□□□□ -0.2
SVIP-205ENST00000533774 SECISBP2LQ93073 1101 aaKnown RBP13.82□□□□□ -0.2
SVIP-205ENST00000533774 PHKBQ93100 1093 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 PGBD4Q96DM1 585 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 KXD1Q9BQD3 176 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 NIFKQ9BYG3 293 aaKnown RBP13.82□□□□□ -0.2
SVIP-205ENST00000533774 GPR62Q9BZJ7 368 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
SVIP-205ENST00000533774 FAM217BQ9NTX9 383 aaPredicted RBP13.82□□□□□ -0.2
SVIP-205ENST00000533774 AGPAT5Q9NUQ2 364 aa13.82□□□□□ -0.2
SVIP-205ENST00000533774 SUCLA2Q9P2R7 463 aaPredicted RBP13.82□□□□□ -0.2
SVIP-205ENST00000533774 CDH7Q9ULB5 785 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms