RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 MTIF3Q9H2K0 278 aaKnown RBP19.14■□□□□ 0.65
NXF1-216ENST00000533499 IKZF4Q9H2S9 585 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 ST6GALNAC4Q9H4F1 302 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 PDZD7Q9H5P4 517 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 LRFN2Q9ULH4 789 aa19.14■□□□□ 0.65
NXF1-216ENST00000533499 ENPP3O14638 875 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 AMHP03971 560 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 KLHL40Q2TBA0 621 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 ZNF658Q5TYW1 1059 aaPredicted RBP19.13■□□□□ 0.65
NXF1-216ENST00000533499 CHRDL2Q6WN34 429 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 RTN4RL1Q86UN2 441 aaPredicted RBP19.13■□□□□ 0.65
NXF1-216ENST00000533499 MAP4K3Q8IVH8 894 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 SCFD1Q8WVM8 642 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 LINC01599Q8WXQ3 324 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 ZBTB45Q96K62 511 aaPredicted RBP19.13■□□□□ 0.65
NXF1-216ENST00000533499 EIF2AQ9BY44 585 aaKnown RBP19.13■□□□□ 0.65
NXF1-216ENST00000533499 TMEM206Q9H813 350 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 TMEM63CQ9P1W3 806 aa19.13■□□□□ 0.65
NXF1-216ENST00000533499 MICAL3Q7RTP6 2002 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 TISP43B9A030 160 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 EIF3DO15371 548 aaKnown RBP eCLIP19.12■□□□□ 0.65
NXF1-216ENST00000533499 EFCAB14O75071 495 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 PPP1R37O75864 691 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 BAIAP3O94812 1187 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 KIF20AO95235 890 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 SARSP49591 514 aaKnown RBP19.12■□□□□ 0.65
NXF1-216ENST00000533499 DSC3Q14574 896 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 SHHQ15465 462 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 SLC27A1Q6PCB7 646 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 EPM2AIP1Q7L775 607 aaPredicted RBP19.12■□□□□ 0.65
NXF1-216ENST00000533499 APBB1IPQ7Z5R6 666 aaPredicted RBP19.12■□□□□ 0.65
NXF1-216ENST00000533499 ZNF507Q8TCN5 953 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 GDF15Q99988 308 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 TSPYL2Q9H2G4 693 aaPredicted RBP19.12■□□□□ 0.65
NXF1-216ENST00000533499 RGS18Q9NS28 235 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 C1orf112Q9NSG2 853 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 CXXC1Q9P0U4 656 aaPredicted RBP19.12■□□□□ 0.65
NXF1-216ENST00000533499 TNFSF13BQ9Y275 285 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 SLC4A7Q9Y6M7 1214 aa19.12■□□□□ 0.65
NXF1-216ENST00000533499 UBE4BO95155 1302 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 A0A1B0GUA9 196 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 ANKRD63C9JTQ0 380 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 CLDN3O15551 220 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 OSTNP61366 133 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 WDR5P61964 334 aaKnown RBP19.11■□□□□ 0.65
NXF1-216ENST00000533499 STIM1Q13586 685 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 KLHL10Q6JEL2 608 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 ZPBP2Q6X784 338 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 SLC24A5Q71RS6 500 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 HS2ST1Q7LGA3 356 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 TMCO2Q7Z6W1 182 aaPredicted RBP19.11■□□□□ 0.65
NXF1-216ENST00000533499 SPATA20Q8TB22 786 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 HERVK_113Q902F9 699 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 CCDC51Q96ER9 411 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 STRA6Q9BX79 667 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 FAM105AQ9NUU6 356 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 PCDHB7Q9Y5E2 793 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 PCDHB2Q9Y5E7 798 aa19.11■□□□□ 0.65
NXF1-216ENST00000533499 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.1■□□□□ 0.65
NXF1-216ENST00000533499 TOM1L1O75674 476 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 RAB27AP51159 221 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 DEFB103AP81534 67 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 MORC3Q14149 939 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 DCAF4L1Q3SXM0 396 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 UBXN11Q5T124 520 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 SASS6Q6UVJ0 657 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 MPZL3Q6UWV2 235 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 THNSL1Q8IYQ7 743 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 POMGNT1Q8WZA1 660 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 LPPQ93052 612 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 ZBED2Q9BTP6 218 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 MSTO1Q9BUK6 570 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 GTPBP4Q9BZE4 634 aaKnown RBP19.1■□□□□ 0.65
NXF1-216ENST00000533499 GBP3Q9H0R5 595 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 PCIF1Q9H4Z3 704 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 PARP2Q9UGN5 583 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 HES2Q9Y543 173 aa19.1■□□□□ 0.65
NXF1-216ENST00000533499 CLIC2O15247 247 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 SKIP12755 728 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 ITGA4P13612 1032 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 HOXD13P35453 343 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 PRCPP42785 496 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 NOLC1Q14978 699 aaKnown RBP eCLIP19.09■□□□□ 0.65
NXF1-216ENST00000533499 KNOP1Q1ED39 458 aaKnown RBP19.09■□□□□ 0.65
NXF1-216ENST00000533499 SEZ6Q53EL9 994 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 ARMCX5Q6P1M9 558 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 ECHDC2Q86YB7 292 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 HACE1Q8IYU2 909 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 TRIML1Q8N9V2 468 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 CDT1Q9H211 546 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 IPPQ9Y573 584 aa19.09■□□□□ 0.65
NXF1-216ENST00000533499 TNRC18O15417 2968 aaPredicted RBP19.09■□□□□ 0.65
NXF1-216ENST00000533499 C9IYK1 514 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 PIGRP01833 764 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 STAG3L1P0CL83 205 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 CYP2J2P51589 502 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 BMT2Q1RMZ1 405 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 SLFN12LQ6IEE8 588 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 SLC39A4Q6P5W5 647 aa19.08■□□□□ 0.64
NXF1-216ENST00000533499 GUF1Q8N442 669 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms