RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 PADI6Q6TGC4 694 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 ANGPTL8Q6UXH0 198 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 KSR1Q8IVT5 923 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 DHX40Q8IX18 779 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 TSPAN17Q96FV3 270 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 EPAS1Q99814 870 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 MMTAG2Q9BU76 263 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CCDC134Q9H6E4 229 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CFAP69A5D8W1 941 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 ASNSP08243 561 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SCP2P22307 547 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 PGM1P36871 562 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 IREB2P48200 963 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 PMS1P54277 932 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 MRPL28Q13084 256 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 GPS1Q13098 491 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 UGP2Q16851 508 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CEP55Q53EZ4 464 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 RCSD1Q6JBY9 416 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 PPM1NQ8N819 430 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 TSSK1BQ9BXA7 367 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 OLFML3Q9NRN5 406 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 NLRP1Q9C000 1473 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 FAM170AA1A519 330 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SNRPFP62306 86 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 UBXN2AP68543 259 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 KRT72Q14CN4 511 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 STXBP2Q15833 593 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SCARA5Q6ZMJ2 495 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 KRT27Q7Z3Y8 459 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 TNIP2Q8NFZ5 429 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CDC26Q8NHZ8 85 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SCFD1Q8WVM8 642 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 PIH1D3Q9NQM4 214 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CDHR2Q9BYE9 1310 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PDXKO00764 312 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 ZNF197O14709 1029 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PRKAB2O43741 272 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 KDM1AO60341 852 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PHF2O75151 1096 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 GNA15P30679 374 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 KCNQ4P56696 695 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 MTMR1Q13613 665 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 DRAP1Q14919 205 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 EAPPQ56P03 285 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 RNF219Q5W0B1 726 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 EFL1Q7Z2Z2 1120 aaKnown RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 STAG2Q8N3U4 1231 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 DDX50Q9BQ39 737 aaKnown RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 TUFT1Q9NNX1 390 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 TBC1D23Q9NUY8 699 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SNX12Q9UMY4 172 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 APOL1O14791 398 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PDHA1P08559 390 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 TRPC1P48995 793 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 BCAR1P56945 870 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 NSUN2Q08J23 767 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 CDO1Q16878 200 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PPP6R3Q5H9R7 873 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 TEX2Q8IWB9 1127 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 ZBED8Q8IZ13 594 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 HIPK4Q8NE63 616 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 ASAP3Q8TDY4 903 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 FBXL5Q9UKA1 691 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 MTO1Q9Y2Z2 717 aaKnown RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 hCG_2014768A0A024R1R8 64 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 E5RI56 91 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 EIF3HO15372 352 aaKnown RBP eCLIP8.04□□□□□ -1.122e-7■■□□□ 12
CTNND1-233ENST00000532787 CDH16O75309 829 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 FTLP02792 175 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 MRPS15P82914 257 aaKnown RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PDIA5Q14554 519 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 HIF1AQ16665 826 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SLC10A5Q5PT55 438 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 NFRKBQ6P4R8 1299 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SRLQ86TD4 932 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 ELOA2Q8IYF1 753 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SPICE1Q8N0Z3 855 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SPATA4Q8NEY3 305 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 EXT2Q93063 718 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 MRPL4Q9BYD3 311 aaKnown RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 FRMD8Q9BZ67 464 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SLC9A2Q9UBY0 812 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PRDM15P57071 1507 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SASH1O94885 1247 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 PLEKHA8P1O95397 391 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 SLC4A1P02730 911 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 ATP2C1P98194 919 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 KLC1Q07866 573 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 TMEM259Q4ZIN3 620 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 MIGA2Q7L4E1 593 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 CATSPER4Q7RTX7 472 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 MB21D2Q8IYB1 491 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-233ENST00000532787 RTKN2Q8IZC4 609 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 GPD1LQ8N335 351 aa8.04□□□□□ -1.12
CTNND1-233ENST00000532787 CCDC24Q8N4L8 307 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms