RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 NR2E1Q9Y466 385 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 IRAK3Q9Y616 596 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 MEIS3P2A8K0S8 358 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 ASAP2O43150 1006 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 OFD1O75665 1012 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 CTSAP10619 480 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 NHLH1Q02575 133 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 CYP4A11Q02928 519 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 SIGLEC14Q08ET2 396 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 NR5A1Q13285 461 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 PTPN21Q16825 1174 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 SUGP1Q8IWZ8 645 aaKnown RBP16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 PBXIP1Q96AQ6 731 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 ADAM7Q9H2U9 754 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 MINDY3Q9H8M7 445 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 RSAD1Q9HA92 442 aa16.95■□□□□ 0.3
DEPDC7-204ENST00000532078 DTNBO60941 627 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 ERLIN2O94905 339 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 GALTP07902 379 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 MTHFRP42898 656 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 SLC11A1P49279 550 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 CTTNQ14247 550 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 PCBP1Q15365 356 aaKnown RBP eCLIP16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 EARS2Q5JPH6 523 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 AGMOQ6ZNB7 445 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 MRPL10Q7Z7H8 261 aaKnown RBP16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 ZBTB33Q86T24 672 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 FERMT3Q86UX7 667 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 RNF149Q8NC42 400 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 BCL7CQ8WUZ0 217 aaPredicted RBP16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 AUTS2Q8WXX7 1259 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 TNFRSF25Q93038 417 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 RIPOR3Q96MK2 946 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 MTRQ99707 1265 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 KANSL3Q9P2N6 904 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 DNAJB4Q9UDY4 337 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 ZDBF2Q9HCK1 2354 aa16.94■□□□□ 0.3
DEPDC7-204ENST00000532078 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 SP100P23497 879 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 HOXA11P31270 313 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 MXD4Q14582 209 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 CALCRLQ16602 461 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 TPH2Q8IWU9 490 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 FBXL6Q8N531 539 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 NECAB1Q8N987 351 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 CNNM3Q8NE01 707 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 CCDC51Q96ER9 411 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 CCDC43Q96MW1 224 aaKnown RBP16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 FAM193BQ96PV7 902 aaPredicted RBP16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 POMKQ9H5K3 350 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 UBN1Q9NPG3 1134 aa16.93■□□□□ 0.3
DEPDC7-204ENST00000532078 TK2O00142 265 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 MAP3K7O43318 606 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 LYPLA2O95372 231 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 NCLP19338 710 aaKnown RBP16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 AXLP30530 894 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 TRIM29Q14134 588 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 TFDP1Q14186 410 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 ME3Q16798 604 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 UBXN11Q5T124 520 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 RARS2Q5T160 578 aaKnown RBP16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 ALYREFQ86V81 257 aaKnown RBP16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 PPFIBP1Q86W92 1011 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 ZNF280BQ86YH2 543 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 PRRX2Q99811 253 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 TMEM175Q9BSA9 504 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 CDH22Q9UJ99 828 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 PCDHA12Q9UN75 941 aa16.92■□□□□ 0.3
DEPDC7-204ENST00000532078 PPP1R3GB7ZBB8 358 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 ZBTB39O15060 712 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 B4GALT3O60512 393 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 NEMFO60524 1076 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 SLITRK3O94933 977 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 LARGE1O95461 756 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 EPCAMP16422 314 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 C6orf132Q5T0Z8 1188 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 KIAA1841Q6NSI8 718 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 NOTUMQ6P988 496 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 ADGRD1Q6QNK2 874 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 NSUN7Q8NE18 718 aaKnown RBP16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 ASIC4Q96FT7 647 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 VN1R3Q9BXE9 311 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 EMILIN2Q9BXX0 1053 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 XPNPEP1Q9NQW7 623 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 ANKEF1Q9NU02 776 aa16.91■□□□□ 0.3
DEPDC7-204ENST00000532078 KMT2EQ8IZD2 1858 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 C2CD4DB7Z1M9 353 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 TSPAN1O60635 241 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 DGAT1O75907 488 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 DDHD2O94830 711 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 ITGA4P13612 1032 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 MRE11P49959 708 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 PTENP60484 403 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 POU5F1BQ06416 359 aa16.9■□□□□ 0.3
DEPDC7-204ENST00000532078 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms