RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 HES2Q9Y543 173 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 IPPQ9Y573 584 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 GALR2O43603 387 aaPredicted RBP20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 TSPAN1O60635 241 aa20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 PFKFB2O60825 505 aa20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 ERLIN2O94905 339 aa20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 ITGA4P13612 1032 aa20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 NR5A1Q13285 461 aa20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 ZSWIM4Q9H7M6 989 aa20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 MRPL17Q9NRX2 175 aaKnown RBP20.54■□□□□ 0.88
SSSCA1-206ENST00000531405 RIF1Q5UIP0 2472 aaKnown RBP20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 ARL5CA6NH57 179 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 F8W810 466 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 ASAP2O43150 1006 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 GAS2O43903 313 aaKnown RBP20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 GFRA3O60609 400 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 SOD2P04179 222 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 MYBP10242 640 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 MLH1P40692 756 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 OR1G1P47890 313 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 AK2P54819 239 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 CCDC149Q6ZUS6 474 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 COLGALT2Q8IYK4 626 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 ZFP42Q96MM3 310 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 GAD1Q99259 594 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 NAP1L4Q99733 375 aaKnown RBP20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 APOL6Q9BWW8 343 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 MIOSQ9NXC5 875 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 ORC3Q9UBD5 711 aaPredicted RBP20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 TRIP11Q15643 1979 aa20.53■□□□□ 0.88
SSSCA1-206ENST00000531405 ST18O60284 1047 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 SLITRK3O94933 977 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 BAG4O95429 457 aaKnown RBP20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 URODP06132 367 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 SCNN1GP51170 649 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 PTENP60484 403 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 SLFN12Q8IYM2 578 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 ASAP3Q8TDY4 903 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 ACSF2Q96CM8 615 aaPredicted RBP20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 EIF2AK1Q9BQI3 630 aaKnown RBP20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 HERC2P3Q9BVR0 1158 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 IRF2BPLQ9H1B7 796 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 MFSD1Q9H3U5 465 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 MAN1C1Q9NR34 630 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 STK39Q9UEW8 545 aa20.52■□□□□ 0.88
SSSCA1-206ENST00000531405 PTPRZ1P23471 2315 aaPredicted RBP20.52■□□□□ 0.87
SSSCA1-206ENST00000531405 INO80B-WBP1J3KQ70 363 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 TEX28O15482 410 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 KRT2P35908 639 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 CAPSQ13938 189 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 ASTLQ6HA08 431 aaPredicted RBP20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 NOTUMQ6P988 496 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 OTOP3Q7RTS5 596 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 CNNM3Q8NE01 707 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 TNFRSF25Q93038 417 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 RPS6KC1Q96S38 1066 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 UBN1Q9NPG3 1134 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 FAM186AA6NE01 2351 aa20.51■□□□□ 0.87
SSSCA1-206ENST00000531405 A0A087WWV3 80 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 WNT7AO00755 349 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 FDPSP14324 419 aaKnown RBP20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 AXLP30530 894 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 NUBP1P53384 320 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 MBTD1Q05BQ5 628 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 DSC1Q08554 894 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 MXD4Q14582 209 aaPredicted RBP20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 AMHR2Q16671 573 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 NECAB1Q8N987 351 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 B3GALT6Q96L58 329 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 CSRNP2Q9H175 543 aa20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 NXF3Q9H4D5 531 aaKnown RBP20.5■□□□□ 0.87
SSSCA1-206ENST00000531405 VWA8A3KMH1 1905 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 INPPL1O15357 1258 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 B4GALT5O43286 388 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 N4BP1O75113 896 aaKnown RBP20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 LARGE1O95461 756 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 EFEMP2O95967 443 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 ADH1AP07327 375 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 SPATA31D3P0C874 917 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 ARF4P18085 180 aaPredicted RBP20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 GLUD2P49448 558 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 FOSBP53539 338 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 TDGQ13569 410 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 TFDP1Q14186 410 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 KIAA0319Q5VV43 1072 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 CWF19L1Q69YN2 538 aaKnown RBP20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 C15orf39Q6ZRI6 1047 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 SPATA31D4Q6ZUB0 917 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 RNF168Q8IYW5 571 aaPredicted RBP20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 FLCNQ8NFG4 579 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 CCDC51Q96ER9 411 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 HSD17B14Q9BPX1 270 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 KCNK12Q9HB15 430 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 PCDHA12Q9UN75 941 aa20.49■□□□□ 0.87
SSSCA1-206ENST00000531405 FRYLO94915 3013 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 CCDC195A0A1B0GUA6 201 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 RFPL2O75678 378 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 GLRA2P23416 452 aa20.48■□□□□ 0.87
SSSCA1-206ENST00000531405 AKAP5P24588 427 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms