RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 CCDC142Q17RM4 750 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 DDX42Q86XP3 938 aaKnown RBP eCLIP15.51■□□□□ 0.07
LRRK1-207ENST00000531270 TBC1D19Q8N5T2 526 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 SPATA33Q96N06 139 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 TGS1Q96RS0 853 aaKnown RBP15.51■□□□□ 0.07
LRRK1-207ENST00000531270 KDM1AO60341 852 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 POLR3FQ9H1D9 316 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-207ENST00000531270 ECT2Q9H8V3 914 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 NCK2O43639 380 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 GSNP06396 782 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 TBC1D9BQ66K14 1250 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 PID1Q7Z2X4 250 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 USP33Q8TEY7 942 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 CAB39Q9Y376 341 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-207ENST00000531270 SYNGAP1Q96PV0 1343 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 CASP1P29466 404 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 BCAR1P56945 870 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 MAP3K10Q02779 954 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 NUDT18Q6ZVK8 323 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 UPP2O95045 317 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 APOA1P02647 267 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 EPB42P16452 691 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 ATXN3P54252 364 aaPredicted RBP15.5■□□□□ 0.07
LRRK1-207ENST00000531270 ALDH18A1P54886 795 aaKnown RBP15.5■□□□□ 0.07
LRRK1-207ENST00000531270 ADAM33Q9BZ11 813 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 GABBR1Q9UBS5 961 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 SLC9A2Q9UBY0 812 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 PRAMEF22A3QJZ6 481 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 ATP8B1O43520 1251 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 TLR2O60603 784 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 CHGBP05060 677 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 IL10P22301 178 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 XXYLT1Q8NBI6 393 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
LRRK1-207ENST00000531270 CYBBP04839 570 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 ST8SIA6P61647 398 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 GIMAP8Q8ND71 665 aaPredicted RBP15.5■□□□□ 0.07
LRRK1-207ENST00000531270 FAM96AQ9H5X1 160 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 KLHL11Q9NVR0 708 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 THOC2Q8NI27 1593 aaKnown RBP15.5■□□□□ 0.07
LRRK1-207ENST00000531270 TRAPPC8Q9Y2L5 1435 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 ADCK1Q86TW2 530 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 ANKMY2Q8IV38 441 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 GLYCTKQ8IVS8 523 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 TTLL6Q8N841 843 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 EML4Q9HC35 981 aaKnown RBP15.5■□□□□ 0.07
LRRK1-207ENST00000531270 HOXC10Q9NYD6 342 aa15.5■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L15C9J2P7 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L13C9JLJ4 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L11C9JVI0 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L18D6R9N7 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L22D6RA61 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L17D6RBQ6 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L19D6RCP7 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L20D6RJB6 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 CYP2D6P10635 497 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L24Q0WX57 530 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 PWP1Q13610 501 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 TTLL4Q14679 1199 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 MFSD14CQ5VZR4 134 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 FAM117BQ6P1L5 589 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USP17L6PQ6QN14 398 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 ANO5Q75V66 913 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 AGAP3Q96P47 875 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 BFARQ9NZS9 450 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 DIS3Q9Y2L1 958 aaKnown RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 COPG1Q9Y678 874 aaKnown RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 CEP55Q53EZ4 464 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 RTKN2Q8IZC4 609 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 OSBP2Q969R2 916 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 NDE1Q9NXR1 346 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 ZNF518AQ6AHZ1 1483 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 SULT1E1P49888 294 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 CDKL3Q8IVW4 592 aaPredicted RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 C1orf54Q8WWF1 131 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 PGBD4Q96DM1 585 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 OTUD5Q96G74 571 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 E2F8A0AVK6 867 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 DDHD2O94830 711 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 ARHGAP18Q8N392 663 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 LBHD1Q9BQE6 289 aaPredicted RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 DMAP1Q9NPF5 467 aaPredicted RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 PIH1D3Q9NQM4 214 aaKnown RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 IP6K2Q9UHH9 426 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 ATP1A3P13637 1013 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 PDAP1Q13442 181 aaKnown RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 SPATA2LQ8IUW3 424 aaPredicted RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 SNX31Q8N9S9 440 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 MCPH1Q8NEM0 835 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 OSBPL1AQ9BXW6 950 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 ASCC2Q9H1I8 757 aaPredicted RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 TDRD3Q9H7E2 651 aaKnown RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 GIMAP4Q9NUV9 329 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 USE1Q9NZ43 259 aa15.49■□□□□ 0.07
LRRK1-207ENST00000531270 H2AFY2Q9P0M6 372 aaPredicted RBP15.49■□□□□ 0.07
LRRK1-207ENST00000531270 FAM32AQ9Y421 112 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms