RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 GTPBP6O43824 516 aaPredicted RBP16.81■□□□□ 0.28
CCS-206ENST00000530961 TLL1O43897 1013 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 PRPF40AO75400 957 aaKnown RBP16.81■□□□□ 0.28
CCS-206ENST00000530961 LIG1P18858 919 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 GTF2BQ00403 316 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 TMEM132AQ24JP5 1023 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
CCS-206ENST00000530961 SFR1Q86XK3 245 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 ECHDC2Q86YB7 292 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 MRPL4Q9BYD3 311 aaKnown RBP16.81■□□□□ 0.28
CCS-206ENST00000530961 MRPL44Q9H9J2 332 aaKnown RBP16.81■□□□□ 0.28
CCS-206ENST00000530961 FAM105AQ9NUU6 356 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 MSRAQ9UJ68 235 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 INSL6Q9Y581 213 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
CCS-206ENST00000530961 LTBP2Q14767 1821 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 GRXCR1A8MXD5 290 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 K7ENM7 598 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 N4BP3O15049 544 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 HOXA2O43364 376 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 GADD45BO75293 160 aaPredicted RBP16.8■□□□□ 0.28
CCS-206ENST00000530961 UPP2O95045 317 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 HTRA4P83105 476 aaPredicted RBP16.8■□□□□ 0.28
CCS-206ENST00000530961 CUL4BQ13620 913 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 ALCAMQ13740 583 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 GRIN2CQ14957 1233 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 NT5DC1Q5TFE4 455 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 SLC27A1Q6PCB7 646 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 STXBP4Q6ZWJ1 553 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 TAS1R3Q7RTX0 852 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 ELOA2Q8IYF1 753 aaPredicted RBP16.8■□□□□ 0.28
CCS-206ENST00000530961 RSPH1Q8WYR4 309 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 HVCN1Q96D96 273 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 PGBD4Q96DM1 585 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 CPB2Q96IY4 423 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 ADPGKQ9BRR6 497 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 BLZF1Q9H2G9 400 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 HOOK1Q9UJC3 728 aaKnown RBP16.8■□□□□ 0.28
CCS-206ENST00000530961 TBX20Q9UMR3 447 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 TNFSF13BQ9Y275 285 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 PCDHB2Q9Y5E7 798 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 PCDHB13Q9Y5F0 798 aa16.8■□□□□ 0.28
CCS-206ENST00000530961 GOLGA6L22H0YM25 854 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 DGKIO75912 1065 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 NMT1P30419 496 aaKnown RBP16.79■□□□□ 0.28
CCS-206ENST00000530961 COASYQ13057 564 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 UBXN11Q5T124 520 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 ATF7IP2Q5U623 682 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 MRPL10Q7Z7H8 261 aaKnown RBP16.79■□□□□ 0.28
CCS-206ENST00000530961 ZNF598Q86UK7 904 aaKnown RBP16.79■□□□□ 0.28
CCS-206ENST00000530961 GRAMD1CQ8IYS0 662 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 HACE1Q8IYU2 909 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 YME1L1Q96TA2 773 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 GAS2L1Q99501 681 aaPredicted RBP16.79■□□□□ 0.28
CCS-206ENST00000530961 ACO2Q99798 780 aaKnown RBP16.79■□□□□ 0.28
CCS-206ENST00000530961 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
CCS-206ENST00000530961 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
CCS-206ENST00000530961 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.78■□□□□ 0.28
CCS-206ENST00000530961 KINO60870 393 aaKnown RBP16.78■□□□□ 0.28
CCS-206ENST00000530961 NR1I2O75469 434 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 RABGGTBP53611 331 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 FAM117BQ6P1L5 589 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 TMCO2Q7Z6W1 182 aaPredicted RBP16.78■□□□□ 0.28
CCS-206ENST00000530961 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
CCS-206ENST00000530961 TARS2Q9BW92 718 aaKnown RBP16.78■□□□□ 0.28
CCS-206ENST00000530961 STRA6Q9BX79 667 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 PDZD7Q9H5P4 517 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 PTPRHQ9HD43 1115 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 UBN1Q9NPG3 1134 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 EXOC7Q9UPT5 735 aa16.78■□□□□ 0.28
CCS-206ENST00000530961 MYH9P35579 1960 aaKnown RBP16.78■□□□□ 0.28
CCS-206ENST00000530961 TTLL13PA6NNM8 815 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 TOM1L1O75674 476 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 PPP1R37O75864 691 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 GCNT3O95395 438 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 PIGRP01833 764 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 CASP1P29466 404 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 EHHADHQ08426 723 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 PSMD2Q13200 908 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 POSTNQ15063 836 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 DCAF4L1Q3SXM0 396 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 TIFAQ96CG3 184 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 ZNF689Q96CS4 500 aaPredicted RBP16.77■□□□□ 0.28
CCS-206ENST00000530961 BICD1Q96G01 975 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 TCHPQ9BT92 498 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 EIF2AQ9BY44 585 aaKnown RBP16.77■□□□□ 0.28
CCS-206ENST00000530961 EPHX3Q9H6B9 360 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 TBC1D7Q9P0N9 293 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 IPPQ9Y573 584 aa16.77■□□□□ 0.28
CCS-206ENST00000530961 EDN1P05305 212 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 ATF7P17544 494 aaPredicted RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 IBSPP21815 317 aaPredicted RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 PROZP22891 400 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 DNAJB2P25686 324 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 PBX2P40425 430 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 LIG4P49917 911 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms