RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 EXOC3O60645 756 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 GNA14O95837 355 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 MTIF2P46199 727 aaKnown RBP15.24■□□□□ 0.03
NXF1-207ENST00000530875 UBASH3AP57075 661 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 PRPF4BQ13523 1007 aaKnown RBP15.24■□□□□ 0.03
NXF1-207ENST00000530875 AMHR2Q16671 573 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 CCDC40Q4G0X9 1142 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 ZPBP2Q6X784 338 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 SRGAP1Q7Z6B7 1085 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 RSPH3Q86UC2 560 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 ZSWIM2Q8NEG5 633 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 POMGNT1Q8WZA1 660 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 ZBTB45Q96K62 511 aaPredicted RBP15.24■□□□□ 0.03
NXF1-207ENST00000530875 ACO2Q99798 780 aaKnown RBP15.24■□□□□ 0.03
NXF1-207ENST00000530875 TRPV6Q9H1D0 765 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 ANKFY1Q9P2R3 1169 aa15.24■□□□□ 0.03
NXF1-207ENST00000530875 R3HCC1Q9Y3T6 440 aaKnown RBP15.24■□□□□ 0.03
NXF1-207ENST00000530875 RBAK-RBAKDNI3L0D1 243 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 B4GALT4O60513 344 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 CTSHP09668 335 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 DARSP14868 501 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 FGFR4P22455 802 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 MNX1P50219 401 aaPredicted RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 COPB1P53618 953 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 MRPS6P82932 125 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 MYBPC2Q14324 1141 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 FAM187BQ17R55 369 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 XXYLT1Q8NBI6 393 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 TMEM174Q8WUU8 243 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 TMEM40Q8WWA1 233 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 SAAL1Q96ER3 474 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 TUBGCP2Q9BSJ2 902 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 SENP6Q9GZR1 1112 aaPredicted RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 HAPLN2Q9GZV7 340 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 VPS16Q9H269 839 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 FRMD4BQ9Y2L6 1034 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 GOLGA8IPA6NC78 632 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 LRRC10BA6NIK2 292 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 GOLGA8JA6NMD2 632 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 SLC16A3O15427 465 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 EPB41P11171 864 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 PRKCSHP14314 528 aaPredicted RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 GARTP22102 1010 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 THPOP40225 353 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 MATR3P43243 847 aaKnown RBP eCLIP15.23■□□□□ 0.031e-14■■■■■ 51.7
NXF1-207ENST00000530875 PTK7Q13308 1070 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 SNX17Q15036 470 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 RDH13Q8NBN7 331 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 KIAA1524Q8TCG1 905 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 DHX38Q92620 1227 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 CELF4Q9BZC1 486 aaKnown RBP15.23■□□□□ 0.03
NXF1-207ENST00000530875 PRDM10Q9NQV6 1147 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 CDY2AQ9Y6F7 541 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 STYXL1Q9Y6J8 313 aa15.23■□□□□ 0.03
NXF1-207ENST00000530875 M0QZ92 97 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 EIF4BP23588 611 aaKnown RBP15.22■□□□□ 0.03
NXF1-207ENST00000530875 GJA8P48165 433 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 CDK7P50613 346 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 CRYBB1P53674 252 aaPredicted RBP15.22■□□□□ 0.03
NXF1-207ENST00000530875 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
NXF1-207ENST00000530875 ATF7IP2Q5U623 682 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 SLFN12LQ6IEE8 588 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 RPAINQ86UA6 219 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 CDR2LQ86X02 465 aaPredicted RBP15.22■□□□□ 0.03
NXF1-207ENST00000530875 FAM186BQ8IYM0 893 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 PRIMPOLQ96LW4 560 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 TCHPQ9BT92 498 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 MCOLN1Q9GZU1 580 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 SPTLC3Q9NUV7 552 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 INTS13Q9NVM9 706 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 TRPV2Q9Y5S1 764 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 CNTNAP2Q9UHC6 1331 aa15.22■□□□□ 0.03
NXF1-207ENST00000530875 A0A1B0GTH6 734 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 N4BP3O15049 544 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 CLDN3O15551 220 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 CBFA2T2O43439 604 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 TSPAN1O60635 241 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 TOM1L1O75674 476 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 ERLIN2O94905 339 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 HARSP12081 509 aaKnown RBP15.21■□□□□ 0.03
NXF1-207ENST00000530875 PTPN21Q16825 1174 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 FRMD5Q7Z6J6 570 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 ZBTB33Q86T24 672 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 DIS3LQ8TF46 1054 aaKnown RBP15.21■□□□□ 0.03
NXF1-207ENST00000530875 CPB2Q96IY4 423 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 MKNK1Q9BUB5 465 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 MSTO1Q9BUK6 570 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 NOC4LQ9BVI4 516 aaKnown RBP15.21■□□□□ 0.03
NXF1-207ENST00000530875 ARMCX3Q9UH62 379 aaPredicted RBP15.21■□□□□ 0.03
NXF1-207ENST00000530875 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.03
NXF1-207ENST00000530875 A0A0B4J269 797 aa15.21■□□□□ 0.02
NXF1-207ENST00000530875 PES1O00541 588 aaKnown RBP15.21■□□□□ 0.02
NXF1-207ENST00000530875 CHRNA1P02708 482 aa15.21■□□□□ 0.02
NXF1-207ENST00000530875 RPLP2P05387 115 aaKnown RBP15.21■□□□□ 0.02
NXF1-207ENST00000530875 ARF4P18085 180 aaPredicted RBP15.21■□□□□ 0.02
NXF1-207ENST00000530875 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms