RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 NTPCRQ9BSD7 190 aaKnown RBP16.27■□□□□ 0.2
SRPRA-204ENST00000530680 CCDC113Q9H0I3 377 aa16.27■□□□□ 0.2
SRPRA-204ENST00000530680 TBX20Q9UMR3 447 aa16.27■□□□□ 0.2
SRPRA-204ENST00000530680 MUC3AQ02505 3323 aa16.27■□□□□ 0.19
SRPRA-204ENST00000530680 UBE4BO95155 1302 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 B4GALT5O43286 388 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 STAG3L1P0CL83 205 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 MYBP10242 640 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 HARSP12081 509 aaKnown RBP16.26■□□□□ 0.19
SRPRA-204ENST00000530680 ARF4P18085 180 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-204ENST00000530680 WDR5P61964 334 aaKnown RBP16.26■□□□□ 0.19
SRPRA-204ENST00000530680 ZNF568Q3ZCX4 644 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 ZC2HC1CQ53FD0 456 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-204ENST00000530680 SLC27A1Q6PCB7 646 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 ZNF720Q7Z2F6 126 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 ELOA2Q8IYF1 753 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-204ENST00000530680 HPS3Q969F9 1004 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 SLC9A7Q96T83 725 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 ZBED2Q9BTP6 218 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 GTPBP4Q9BZE4 634 aaKnown RBP16.26■□□□□ 0.19
SRPRA-204ENST00000530680 TSPYL2Q9H2G4 693 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-204ENST00000530680 TMX1Q9H3N1 280 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 FZD8Q9H461 694 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 SLC39A2Q9NP94 309 aa16.26■□□□□ 0.19
SRPRA-204ENST00000530680 EIF3DO15371 548 aaKnown RBP eCLIP16.25■□□□□ 0.19
SRPRA-204ENST00000530680 UPP2O95045 317 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 NPTXRO95502 500 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 GTF2BQ00403 316 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 STIM1Q13586 685 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 KCNB1Q14721 858 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 DCAF4L1Q3SXM0 396 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 C16orf59Q7L2K0 433 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 GPT2Q8TD30 523 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 ERCC4Q92889 916 aaPredicted RBP16.25■□□□□ 0.19
SRPRA-204ENST00000530680 GSDMAQ96QA5 445 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 ST6GALNAC4Q9H4F1 302 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 TMEM206Q9H813 350 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 RGS18Q9NS28 235 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 PCDHB7Q9Y5E2 793 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 PTPRSQ13332 1948 aa16.25■□□□□ 0.19
SRPRA-204ENST00000530680 KLRC4O43908 158 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 MGEA5O60502 916 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
SRPRA-204ENST00000530680 ATP2A2P16615 1042 aaKnown RBP16.24■□□□□ 0.19
SRPRA-204ENST00000530680 SARSP49591 514 aaKnown RBP16.24■□□□□ 0.19
SRPRA-204ENST00000530680 AMHR2Q16671 573 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 FAM117BQ6P1L5 589 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 HS2ST1Q7LGA3 356 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 ZBTB33Q86T24 672 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 CDR2LQ86X02 465 aaPredicted RBP16.24■□□□□ 0.19
SRPRA-204ENST00000530680 MAP4K3Q8IVH8 894 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 ABI1Q8IZP0 508 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 PGBD4Q96DM1 585 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 TARS2Q9BW92 718 aaKnown RBP16.24■□□□□ 0.19
SRPRA-204ENST00000530680 APOL6Q9BWW8 343 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 PDZD7Q9H5P4 517 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 FAM105AQ9NUU6 356 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 PCDHA5Q9Y5H7 936 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 GBF1Q92538 1859 aa16.24■□□□□ 0.19
SRPRA-204ENST00000530680 ENPP3O14638 875 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 CLDN3O15551 220 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 HOXA2O43364 376 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 TOM1L1O75674 476 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 RHOBTB3O94955 611 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 CASP5P51878 434 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 DEFB103AP81534 67 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 DSC3Q14574 896 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 NOLC1Q14978 699 aaKnown RBP eCLIP16.23■□□□□ 0.19
SRPRA-204ENST00000530680 TCTN1Q2MV58 587 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 TJAP1Q5JTD0 557 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 MPZL3Q6UWV2 235 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 ZPBP2Q6X784 338 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
SRPRA-204ENST00000530680 TAS1R3Q7RTX0 852 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 NPAS4Q8IUM7 802 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 NELFCDQ8IXH7 590 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 NOC3LQ8WTT2 800 aaKnown RBP16.23■□□□□ 0.19
SRPRA-204ENST00000530680 LINC01599Q8WXQ3 324 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 ACO2Q99798 780 aaKnown RBP16.23■□□□□ 0.19
SRPRA-204ENST00000530680 CXXC1Q9P0U4 656 aaPredicted RBP16.23■□□□□ 0.19
SRPRA-204ENST00000530680 TNFSF13BQ9Y275 285 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 USP20Q9Y2K6 914 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 PCDHB2Q9Y5E7 798 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 CITO14578 2027 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 TTC3P53804 2025 aa16.23■□□□□ 0.19
SRPRA-204ENST00000530680 A0A1B0GUA9 196 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.22■□□□□ 0.19
SRPRA-204ENST00000530680 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
SRPRA-204ENST00000530680 BIN1O00499 593 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 DNAJB2P25686 324 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 HOXA11P31270 313 aaPredicted RBP16.22■□□□□ 0.19
SRPRA-204ENST00000530680 GRIN2CQ14957 1233 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 CCDC183Q5T5S1 534 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 NT5DC1Q5TFE4 455 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 SLFN12LQ6IEE8 588 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 POMGNT1Q8WZA1 660 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 VWCEQ96DN2 955 aa16.22■□□□□ 0.19
SRPRA-204ENST00000530680 FIZ1Q96SL8 496 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms