RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 H2AFZP0C0S5 128 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 ABCB4P21439 1286 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 ADCY2Q08462 1091 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 AP1ARQ63HQ0 302 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 H2AFVQ71UI9 128 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 EXOC3L1Q86VI1 746 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 MKL1Q969V6 931 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 ARHGEF3Q9NR81 526 aa15.27■□□□□ 0.04
USP48-213ENST00000529637 TYW1Q9NV66 732 aaKnown RBP15.27■□□□□ 0.04
USP48-213ENST00000529637 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.03
USP48-213ENST00000529637 KLHL33A6NCF5 533 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 PDXKO00764 312 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.03
USP48-213ENST00000529637 ATP2A2P16615 1042 aaKnown RBP15.27■□□□□ 0.03
USP48-213ENST00000529637 SREBF1P36956 1147 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 ECE1P42892 770 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 GALCP54803 685 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 AUHQ13825 339 aaKnown RBP15.27■□□□□ 0.03
USP48-213ENST00000529637 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.03
USP48-213ENST00000529637 COL23A1Q86Y22 540 aaPredicted RBP15.27■□□□□ 0.03
USP48-213ENST00000529637 JAMLQ86YT9 394 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 FAM186BQ8IYM0 893 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 LENG9Q96B70 501 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 DYDC2Q96IM9 177 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 GRHL1Q9NZI5 618 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 TMOD4Q9NZQ9 345 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 PRR12Q9ULL5 1215 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 BCS1LQ9Y276 419 aa15.27■□□□□ 0.03
USP48-213ENST00000529637 DPPA5A6NC42 116 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 A6NHS1 94 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 GH1P01241 217 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 HOXD13P35453 343 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 MARSP56192 900 aaKnown RBP15.26■□□□□ 0.03
USP48-213ENST00000529637 TAF11Q15544 211 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 AOC3Q16853 763 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 KIAA1755Q5JYT7 1200 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 NUGGCQ68CJ6 796 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 FOXR2Q6PJQ5 311 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 SYCP3Q8IZU3 236 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 ANKLE1Q8NAG6 615 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 OSBPL1AQ9BXW6 950 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 RAB17Q9H0T7 212 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 CCDC134Q9H6E4 229 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 GAS7O60861 476 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 PDE6CP51160 858 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 JAG1P78504 1218 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 MGAT5Q09328 741 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 ARHGAP44Q17R89 818 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 LONRF1Q17RB8 773 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 KRT27Q7Z3Y8 459 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 SLC35G2Q8TBE7 412 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 DYDC1Q8WWB3 177 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 ALG3Q92685 438 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 UTP4Q969X6 686 aaKnown RBP15.26■□□□□ 0.03
USP48-213ENST00000529637 METTL14Q9HCE5 456 aaKnown RBP15.26■□□□□ 0.03
USP48-213ENST00000529637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■■■■■ 47.3
USP48-213ENST00000529637 AMFRQ9UKV5 643 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 TRAF3IP3Q9Y228 551 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 KRT13P13646 458 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 RPL21P46778 160 aaKnown RBP15.26■□□□□ 0.03
USP48-213ENST00000529637 GNPTABQ3T906 1256 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 ASRGL1Q7L266 308 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 HS2ST1Q7LGA3 356 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 ZDHHC14Q8IZN3 488 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
USP48-213ENST00000529637 NENFQ9UMX5 172 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 SPATA31A6Q5VVP1 1343 aa15.26■□□□□ 0.03
USP48-213ENST00000529637 A0A1W2PRG0 241 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 ANKRD63C9JTQ0 380 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 TBX3O15119 743 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 AGTP01019 485 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 ATP4AP20648 1035 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 STAT2P52630 851 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 Q4G0T1 1027 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 C10orf76Q5T2E6 689 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 RINT1Q6NUQ1 792 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 MOXD1Q6UVY6 613 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 ANKRD42Q8N9B4 389 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 NAF1Q96HR8 494 aaKnown RBP15.25■□□□□ 0.03
USP48-213ENST00000529637 PIDD1Q9HB75 910 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 EYA4O95677 639 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 COG2Q14746 738 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 STRIP1Q5VSL9 837 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 GLYCTKQ8IVS8 523 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 FAM178BQ8IXR5 827 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 LNX1Q8TBB1 728 aaPredicted RBP15.25■□□□□ 0.03
USP48-213ENST00000529637 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 SLC35C1Q96A29 364 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 TMOD2Q9NZR1 351 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 ZFATQ9P243 1243 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 BZW2Q9Y6E2 419 aaKnown RBP15.25■□□□□ 0.03
USP48-213ENST00000529637 ASTN1O14525 1302 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 ADAMTSL1Q8N6G6 1762 aa15.25■□□□□ 0.03
USP48-213ENST00000529637 POLD1P28340 1107 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 STAT1P42224 750 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms