RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 HOXA11P31270 313 aaPredicted RBP21.29■■□□□ 1
SSRP1-204ENST00000529002 JAK3P52333 1124 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 STARD6P59095 220 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 NTHL1P78549 312 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 CDC42EP1Q00587 391 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 ADCK5Q3MIX3 580 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 XKR3Q5GH77 459 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 PARM1Q6UWI2 310 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 ESYT1Q9BSJ8 1104 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 RHOBTB2Q9BYZ6 727 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 SPATA6Q9NWH7 488 aaPredicted RBP21.29■■□□□ 1
SSRP1-204ENST00000529002 NOTCH4Q99466 2003 aa21.29■■□□□ 1
SSRP1-204ENST00000529002 DCDC2BA2VCK2 349 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 CD72P21854 359 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 SFNP31947 248 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 CYP26C1Q6V0L0 522 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 ZNF579Q8NAF0 562 aaKnown RBP21.28■■□□□ 1
SSRP1-204ENST00000529002 SMG8Q8ND04 991 aaKnown RBP21.28■■□□□ 1
SSRP1-204ENST00000529002 RABGGTAQ92696 567 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 GAD1Q99259 594 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 RIT2Q99578 217 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 ANO2Q9NQ90 1003 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 BMP2KQ9NSY1 1161 aaPredicted RBP21.28■■□□□ 1
SSRP1-204ENST00000529002 KANSL3Q9P2N6 904 aa21.28■■□□□ 1
SSRP1-204ENST00000529002 PSMD10O75832 226 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 SRGAP2CP0DJJ0 459 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 NPEPPSP55786 919 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 DSG1Q02413 1049 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 CSTF1Q05048 431 aaKnown RBP21.27■■□□□ 1
SSRP1-204ENST00000529002 ANO5Q75V66 913 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 PRKD2Q9BZL6 878 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.27■■□□□ 1
SSRP1-204ENST00000529002 STK39Q9UEW8 545 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 HES2Q9Y543 173 aa21.27■■□□□ 1
SSRP1-204ENST00000529002 UBXN2BQ14CS0 331 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 TSSK4Q6SA08 328 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 DHX32Q7L7V1 743 aaKnown RBP21.26■□□□□ 0.99
SSRP1-204ENST00000529002 RASEFQ8IZ41 740 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 PHKBQ93100 1093 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 TMEM143Q96AN5 459 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 ZFP42Q96MM3 310 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 EIF2AQ9BY44 585 aaKnown RBP21.26■□□□□ 0.99
SSRP1-204ENST00000529002 GPR62Q9BZJ7 368 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 CACNG4Q9UBN1 327 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 SSX2IPQ9Y2D8 614 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 COL4A3BPQ9Y5P4 624 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 CNTNAP2Q9UHC6 1331 aa21.26■□□□□ 0.99
SSRP1-204ENST00000529002 KANSL1LA0AUZ9 987 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 LAMTOR5O43504 91 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 PAPLNO95428 1278 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 CPA1P15085 419 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 NCLP19338 710 aaKnown RBP21.25■□□□□ 0.99
SSRP1-204ENST00000529002 MLH1P40692 756 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 SCNN1GP51170 649 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 RALGAPA1Q6GYQ0 2036 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 LILRA6Q6PI73 481 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 ELMSAN1Q6PJG2 1045 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 B3GNT9Q6UX72 402 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 GRASPQ7Z6J2 395 aaPredicted RBP21.25■□□□□ 0.99
SSRP1-204ENST00000529002 APOL6Q9BWW8 343 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 CHST7Q9NS84 486 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 DPP7Q9UHL4 492 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 IPPQ9Y573 584 aa21.25■□□□□ 0.99
SSRP1-204ENST00000529002 ARL5CA6NH57 179 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 TDP2O95551 362 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 ITGA4P13612 1032 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 FSHRP23945 695 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 GNA11P29992 359 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 DSC1Q08554 894 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 PRSS55Q6UWB4 352 aaPredicted RBP21.24■□□□□ 0.99
SSRP1-204ENST00000529002 PRPF31Q8WWY3 499 aaKnown RBP21.24■□□□□ 0.99
SSRP1-204ENST00000529002 DDX23Q9BUQ8 820 aaKnown RBP21.24■□□□□ 0.99
SSRP1-204ENST00000529002 BCO2Q9BYV7 579 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 PLEKHA4Q9H4M7 779 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 VPS54Q9P1Q0 977 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 ARID2Q68CP9 1835 aa21.24■□□□□ 0.99
SSRP1-204ENST00000529002 FAM170BA6NMN3 283 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 TGM1P22735 817 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 MLF2Q15773 248 aaPredicted RBP21.23■□□□□ 0.99
SSRP1-204ENST00000529002 ZNF528Q3MIS6 628 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 SLC44A4Q53GD3 710 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 CCDC12Q8WUD4 166 aaPredicted RBP21.23■□□□□ 0.99
SSRP1-204ENST00000529002 HDAC7Q8WUI4 952 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 ATRIPQ8WXE1 791 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 SHDQ96IW2 340 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 CPB2Q96IY4 423 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 PARD6AQ9NPB6 346 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 ZDHHC7Q9NXF8 308 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 FBXO4Q9UKT5 387 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 SMG5Q9UPR3 1016 aaKnown RBP21.23■□□□□ 0.99
SSRP1-204ENST00000529002 CHD8Q9HCK8 2581 aa21.23■□□□□ 0.99
SSRP1-204ENST00000529002 VWA8A3KMH1 1905 aa21.22■□□□□ 0.99
SSRP1-204ENST00000529002 EML1O00423 815 aa21.22■□□□□ 0.99
SSRP1-204ENST00000529002 SPTLC1O15269 473 aa21.22■□□□□ 0.99
SSRP1-204ENST00000529002 PRPF3O43395 683 aaKnown RBP21.22■□□□□ 0.99
SSRP1-204ENST00000529002 ZMYND10O75800 440 aa21.22■□□□□ 0.99
SSRP1-204ENST00000529002 FUT10Q6P4F1 479 aa21.22■□□□□ 0.99
SSRP1-204ENST00000529002 RDM1Q8NG50 284 aa21.22■□□□□ 0.99
SSRP1-204ENST00000529002 TBCKQ8TEA7 893 aa21.22■□□□□ 0.99
SSRP1-204ENST00000529002 KXD1Q9BQD3 176 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms