RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 MFN1Q8IWA4 741 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 TBC1D16Q8TBP0 767 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 MAGED2Q9UNF1 606 aaPredicted RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 TTLL3Q9Y4R7 772 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 LCA5LO95447 670 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 MRPS35P82673 323 aaKnown RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 RASA3Q14644 834 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 CWF19L1Q69YN2 538 aaKnown RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 TEX9Q8N6V9 391 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 GBP5Q96PP8 586 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 ZNF317Q96PQ6 595 aaPredicted RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 SH3GLB2Q9NR46 395 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 ARL2BPQ9Y2Y0 163 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 ROR2Q01974 943 aaKnown RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 CUL3Q13618 768 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 RASIP1Q5U651 963 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 CC2D2BQ6DHV5 1058 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 DEPTORQ8TB45 409 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 TNFRSF25Q93038 417 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 NXF1Q9UBU9 619 aaKnown RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 SCOCQ9UIL1 159 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 PYGLP06737 847 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 ECHS1P30084 290 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 RNASELQ05823 741 aaKnown RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 HGSNATQ68CP4 663 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 CASC4Q6P4E1 433 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 SCARA5Q6ZMJ2 495 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 RPS6KC1Q96S38 1066 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 C1orf112Q9NSG2 853 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 PARP4Q9UKK3 1724 aaKnown RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 KCPQ6ZWJ8 1503 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 ATMINO43313 823 aaPredicted RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 CYTH3O43739 400 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 FESP07332 822 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 RFC5P40937 340 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 KNOP1Q1ED39 458 aaKnown RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 FBXO25Q8TCJ0 367 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 ZNF512BQ96KM6 892 aaPredicted RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 ZNF341Q9BYN7 854 aa19.12■□□□□ 0.65
LTBP3-210ENST00000528516 PABPC3Q9H361 631 aaKnown RBP19.12■□□□□ 0.65
LTBP3-210ENST00000528516 SYNJ2BP-COX16A0A087WUM0 186 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 FOSP01100 380 aaPredicted RBP19.11■□□□□ 0.65
LTBP3-210ENST00000528516 HHATQ5VTY9 493 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 PRAMEF18Q5VWM3 479 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 CENPTQ96BT3 561 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 DHX36Q9H2U1 1008 aaKnown RBP19.11■□□□□ 0.65
LTBP3-210ENST00000528516 COX16Q9P0S2 106 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 TLR2O60603 784 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 ZBED4O75132 1171 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 ABL2P42684 1182 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 PTK2Q05397 1052 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 SGO2Q562F6 1265 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 SYCP2LQ5T4T6 812 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 PIGWQ7Z7B1 504 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 ZBTB33Q86T24 672 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 NLGN1Q8N2Q7 840 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 VGLL2Q8N8G2 317 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 SLC30A5Q8TAD4 765 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 ACTRT1Q8TDG2 376 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 SCFD2Q8WU76 684 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 MAK16Q9BXY0 300 aaKnown RBP19.11■□□□□ 0.65
LTBP3-210ENST00000528516 SEMA4AQ9H3S1 761 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 PIDD1Q9HB75 910 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 PVALEFA0A1B0GWK0 134 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 AGTP01019 485 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 MAPK4P31152 587 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 KCNJ1P48048 391 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 NPY5RQ15761 445 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 LONRF1Q17RB8 773 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 SEPT14Q6ZU15 432 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 ZC3H18Q86VM9 953 aaKnown RBP19.11■□□□□ 0.65
LTBP3-210ENST00000528516 ZNF354CQ86Y25 554 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 FGD4Q96M96 766 aa19.11■□□□□ 0.65
LTBP3-210ENST00000528516 RAVER2Q9HCJ3 691 aaKnown RBP19.11■□□□□ 0.65
LTBP3-210ENST00000528516 MARK3P27448 753 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 LIN9Q5TKA1 542 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 CYFIP1Q7L576 1253 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 CNKSR1Q969H4 720 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 REEP2Q9BRK0 252 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 JMJD4Q9H9V9 463 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 TMEM120BA0PK00 339 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 NSFP46459 744 aaKnown RBP19.1■□□□□ 0.65
LTBP3-210ENST00000528516 CASP4P49662 377 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 CENPPQ6IPU0 288 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 NIM1KQ8IY84 436 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 CYP2W1Q8TAV3 490 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 TGS1Q96RS0 853 aaKnown RBP19.1■□□□□ 0.65
LTBP3-210ENST00000528516 TXLNGQ9NUQ3 528 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 FBXO28Q9NVF7 368 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 C4AP0C0L4 1744 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 C4BP0C0L5 1744 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 ANKRD35Q8N283 1001 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 DNAJC9Q8WXX5 260 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 NACC1Q96RE7 527 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 EXOC7Q9UPT5 735 aa19.1■□□□□ 0.65
LTBP3-210ENST00000528516 GOLGA8MH3BSY2 632 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 FTLP02792 175 aaPredicted RBP19.09■□□□□ 0.65
LTBP3-210ENST00000528516 ZNF543Q08ER8 600 aa19.09■□□□□ 0.65
LTBP3-210ENST00000528516 FUT2Q10981 343 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms