RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 MTDHQ86UE4 582 aaKnown RBP13.36□□□□□ -0.27
TSKU-203ENST00000527881 GPBP1Q86WP2 473 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 KRT35Q92764 455 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 FAM136AQ96C01 138 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 CRAMP1Q96RY5 1269 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 CHD4Q14839 1912 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 IGSF9BQ9UPX0 1349 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 A0A0A6YYK5 440 aaPredicted RBP13.36□□□□□ -0.27
TSKU-203ENST00000527881 COQ9O75208 318 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 PTPRN2Q92932 1015 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
TSKU-203ENST00000527881 ARHGEF26Q96DR7 871 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 THAP2Q9H0W7 228 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 ALG6Q9Y672 507 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 AKAP11Q9UKA4 1901 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.36□□□□□ -0.27
TSKU-203ENST00000527881 FAM47DPA6NHR8 397 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 POC1B-GALNT4F8VUJ3 575 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 TDP2O95551 362 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 LMNB1P20700 586 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 CLUL1Q15846 466 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 CERKLQ49MI3 558 aaPredicted RBP13.36□□□□□ -0.27
TSKU-203ENST00000527881 C4orf50Q6ZRC1 276 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 CABLES1Q8TDN4 633 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 SPIRE2Q8WWL2 714 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 SMC6Q96SB8 1091 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
TSKU-203ENST00000527881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.27
TSKU-203ENST00000527881 A0A0G2JND7 137 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 CA4P22748 312 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 PTGIRP43119 386 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 TMED1Q13445 227 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 DNAJC10Q8IXB1 793 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 RBM12BQ8IXT5 1001 aaKnown RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 SNRNP27Q8WVK2 155 aaKnown RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 C1orf54Q8WWF1 131 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 C9orf72Q96LT7 481 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 ZNF184Q99676 751 aaPredicted RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 TTC7AQ9ULT0 858 aaPredicted RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 NAALADL1Q9UQQ1 740 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 USP17L3A6NCW0 530 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 USP17L4A6NCW7 530 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 HSPA6P17066 643 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 FGFR2P21802 821 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 CETN2P41208 172 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 YARSP54577 528 aaKnown RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 ACVR2BQ13705 512 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 THOC5Q13769 683 aaKnown RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 SPARCL1Q14515 664 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 CMPK2Q5EBM0 449 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 NLRP9Q7RTR0 991 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 USP17L1Q7RTZ2 530 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 NMD3Q96D46 503 aaKnown RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 PWWP2AQ96N64 755 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 TTC1Q99614 292 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 SPZ1Q9BXG8 430 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 E9PMD0 336 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 LRRN2O75325 713 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 TBX10O75333 385 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 HNRNPCP07910 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
TSKU-203ENST00000527881 TSPY3P0CV98 308 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 TSPY8P0CW00 308 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 ADCY8P40145 1251 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 MAGEA8P43361 318 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 NPEPPSP55786 919 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 KRT17Q04695 432 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 ZCWPW2Q504Y3 356 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 SH2D4BQ5SQS7 431 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 TRIM42Q8IWZ5 723 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 ST13P4Q8IZP2 240 aaPredicted RBP13.35□□□□□ -0.27
TSKU-203ENST00000527881 C4orf33Q8N1A6 199 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 ATL2Q8NHH9 583 aa13.35□□□□□ -0.27
TSKU-203ENST00000527881 PKD1L3Q7Z443 1732 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 TCRBV7S2A1N4TA0A589 114 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 LYNP07948 512 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 SERPINB3P29508 390 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 CHKAP35790 457 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 COILP38432 576 aaPredicted RBP13.34□□□□□ -0.27
TSKU-203ENST00000527881 PSMC4P43686 418 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
TSKU-203ENST00000527881 ACSBG2Q5FVE4 666 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 IZUMO2Q6UXV1 221 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 NRG4Q8WWG1 115 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 BRIP1Q9BX63 1249 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 SPATA16Q9BXB7 569 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 AJAP1Q9UKB5 411 aaPredicted RBP13.34□□□□□ -0.27
TSKU-203ENST00000527881 KIAA1024Q9UPX6 916 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 MEGF6O75095 1541 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 CLIC2O15247 247 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 CCDC22O60826 627 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 CDH16O75309 829 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 PSMG1O95456 288 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms