RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 ECHDC2Q86YB7 292 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 NPAS4Q8IUM7 802 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 HERC6Q8IVU3 1022 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 ELOA2Q8IYF1 753 aaPredicted RBP18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 ERCC4Q92889 916 aaPredicted RBP18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 CCDC47Q96A33 483 aaKnown RBP18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 HVCN1Q96D96 273 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 BICD1Q96G01 975 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 TRAIPQ9BWF2 469 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 SLC39A2Q9NP94 309 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 LRFN2Q9ULH4 789 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 PCDHB13Q9Y5F0 798 aa18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 FNDC1Q4ZHG4 1894 aaPredicted RBP18.88■□□□□ 0.61
FOXRED1-208ENST00000527875 NPTXRO95502 500 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 STAG3L1P0CL83 205 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 MCM4P33991 863 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 RAB27AP51159 221 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 ALCAMQ13740 583 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 L1TD1Q5T7N2 865 aaKnown RBP18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 MAP4K3Q8IVH8 894 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 CRIPAKQ8N1N5 446 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 RNF169Q8NCN4 708 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 TMEM161AQ9NX61 479 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 TNFSF13BQ9Y275 285 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 PCDHB7Q9Y5E2 793 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 PCDHB2Q9Y5E7 798 aa18.87■□□□□ 0.61
FOXRED1-208ENST00000527875 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 HNRNPDLO14979 420 aaKnown RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ZNF623O75123 536 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 PRPF6O94906 941 aaKnown RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 RHOBTB3O94955 611 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 SMC2O95347 1197 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 GJB5O95377 273 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 SKIP12755 728 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ATF7P17544 494 aaPredicted RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 LIG4P49917 911 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 RABGGTBP53611 331 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 KCNA1Q09470 495 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 PSMD2Q13200 908 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 KCNB1Q14721 858 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ZPBP2Q6X784 338 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 STXBP4Q6ZWJ1 553 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ZNF598Q86UK7 904 aaKnown RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 GPT2Q8TD30 523 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ZBTB45Q96K62 511 aaPredicted RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ACCSQ96QU6 501 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ADPGKQ9BRR6 497 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ZBED2Q9BTP6 218 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 TRIM6Q9C030 488 aaPredicted RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 ELAC1Q9H777 363 aaKnown RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 RNF216Q9NWF9 866 aaPredicted RBP18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 PCDHA5Q9Y5H7 936 aa18.86■□□□□ 0.61
FOXRED1-208ENST00000527875 EIF3DO15371 548 aaKnown RBP eCLIP18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 EOMESO95936 686 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 PIGRP01833 764 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 PROZP22891 400 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 STK4Q13043 487 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 CAMK4Q16566 473 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 LRIT3Q3SXY7 679 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 ZNF568Q3ZCX4 644 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 MPZL3Q6UWV2 235 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 EPM2AIP1Q7L775 607 aaPredicted RBP18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 ZBTB33Q86T24 672 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 KIAA0895Q8NCT3 520 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 SMG8Q8ND04 991 aaKnown RBP18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 LPPQ93052 612 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 TCHPQ9BT92 498 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 IKZF4Q9H2S9 585 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 PTPRHQ9HD43 1115 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 ANKFY1Q9P2R3 1169 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 EXOC7Q9UPT5 735 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 IPPQ9Y573 584 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 COL4A6Q14031 1691 aa18.85■□□□□ 0.61
FOXRED1-208ENST00000527875 ABLIM1O14639 778 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 TLL1O43897 1013 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 TOM1L1O75674 476 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 FGFR1P11362 822 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 MATR3P43243 847 aaKnown RBP eCLIP18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 DCAF4L1Q3SXM0 396 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 SLC39A4Q6P5W5 647 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 MRPL10Q7Z7H8 261 aaKnown RBP18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 SYCP3Q8IZU3 236 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 SPATA20Q8TB22 786 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 ZNF507Q8TCN5 953 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 SCFD1Q8WVM8 642 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 GSDMAQ96QA5 445 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 CDT1Q9H211 546 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 CLSTN2Q9H4D0 955 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 NXF3Q9H4D5 531 aaKnown RBP18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 RMND1Q9NWS8 449 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 HES2Q9Y543 173 aa18.84■□□□□ 0.61
FOXRED1-208ENST00000527875 CITO14578 2027 aa18.83■□□□□ 0.61
FOXRED1-208ENST00000527875 UBE4BO95155 1302 aa18.83■□□□□ 0.61
FOXRED1-208ENST00000527875 TRIP11Q15643 1979 aa18.83■□□□□ 0.61
FOXRED1-208ENST00000527875 MEIS3P2A8K0S8 358 aa18.83■□□□□ 0.6
FOXRED1-208ENST00000527875 TISP43B9A030 160 aa18.83■□□□□ 0.6
FOXRED1-208ENST00000527875 ANKRD63C9JTQ0 380 aa18.83■□□□□ 0.6
FOXRED1-208ENST00000527875 CLDN3O15551 220 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms