RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 LCHNA4D1U4 455 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 K7ENM7 598 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 KPNA5O15131 536 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 FGF10O15520 208 aaPredicted RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 MEFVO15553 781 aaPredicted RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 KDM1AO60341 852 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 KRT37O76014 449 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ENDOUP21128 410 aaKnown RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 CALRP27797 417 aaKnown RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 LSP1P33241 339 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 CASP5P51878 434 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 CACNB3P54284 484 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 SMAD3P84022 425 aaKnown RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ZNF200P98182 395 aaPredicted RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 SRSF2Q01130 221 aaKnown RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 KIF23Q02241 960 aaPredicted RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ICA1Q05084 483 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 NR1I3Q14994 352 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 SMAD2Q15796 467 aaKnown RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ANO4Q32M45 955 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 FAM47CQ5HY64 1035 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 SPECC1Q5M775 1068 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 WDR45BQ5MNZ6 344 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 VPS53Q5VIR6 699 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 FAAH2Q6GMR7 532 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 SWSAP1Q6NVH7 229 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 NPNTQ6UXI9 565 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ZPBP2Q6X784 338 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 LBX2Q6XYB7 198 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 USP45Q70EL2 814 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 OTOP1Q7RTM1 612 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 SPRED1Q7Z699 444 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ANKRD23Q86SG2 305 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ADGRG2Q8IZP9 1017 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 NAT16Q8N8M0 369 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 C2orf69Q8N8R5 385 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 C1GALT1C1Q96EU7 318 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 TTC14Q96N46 770 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 PTCHD1Q96NR3 888 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 LRFN3Q9BTN0 628 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ZDHHC5Q9C0B5 715 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 NUP62CLQ9H1M0 184 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ZNF277Q9NRM2 450 aaPredicted RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 TMEFF2Q9UIK5 374 aaPredicted RBP4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 TUBD1Q9UJT1 453 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 CORO2BQ9UQ03 480 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 AFG3L2Q9Y4W6 797 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 GPR45Q9Y5Y3 372 aa4.52□□□□□ -1.69
CLNS1A-208ENST00000527265 ITIH6Q6UXX5 1313 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 IRS2Q9Y4H2 1338 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 NPHP3-ACAD11A0A0J9YXS1 232 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SH3D21A4FU49 640 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 H7C1D1 291 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 ARNTLO00327 626 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 NOBOXO60393 691 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 NDUFS2O75306 463 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 BAIAP3O94812 1187 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 CNOT4O95628 575 aaKnown RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 OSMP13725 252 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 PRKCAP17252 672 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 PAMP19021 973 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SLC9A1P19634 815 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SMARCA1P28370 1054 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 MAPKAPK2P49137 400 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 MTNR1BP49286 362 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 ZBED6P86452 979 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 PRKG2Q13237 762 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 CNN3Q15417 329 aaKnown RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 TESK1Q15569 626 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 ARHGAP44Q17R89 818 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 UAP1L1Q3KQV9 507 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 PLEKHN1Q494U1 663 aaPredicted RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 HSF5Q4G112 596 aaPredicted RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 AGAP9Q5VTM2 703 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 IZUMO3Q5VZ72 239 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 E4F1Q66K89 784 aaPredicted RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 RPTNQ6XPR3 784 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 PDZD4Q76G19 769 aaPredicted RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 CCDC103Q8IW40 242 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 Q8N1X5 172 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 ZNF610Q8N9Z0 462 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SSH1Q8WYL5 1049 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 LRTOMTQ8WZ04 291 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 ZBTB10Q96DT7 871 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 FCRL2Q96LA5 508 aaPredicted RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 CDK5RAP1Q96SZ6 601 aaKnown RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 NELL2Q99435 816 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SEC62Q99442 399 aaKnown RBP4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SLC26A6Q9BXS9 759 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 PCED1AQ9H1Q7 454 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 UNC45AQ9H3U1 944 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SMYD2Q9NRG4 433 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 ERVK13-1Q9NX77 482 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 CBLCQ9ULV8 474 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 TMX2Q9Y320 296 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 PCDHGB2Q9Y5G2 931 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 SPO11Q9Y5K1 396 aa4.51□□□□□ -1.69
CLNS1A-208ENST00000527265 TRBV23OR9-2A0A075B6M9 112 aa4.5□□□□□ -1.69
CLNS1A-208ENST00000527265 A0A1W2PQ27 194 aa4.5□□□□□ -1.69
CLNS1A-208ENST00000527265 A0A1W2PQ64 194 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms