RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ARHGAP1Q07960 439 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 PPP3CAQ08209 521 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 IRF2BP2Q7Z5L9 587 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 STK33Q9BYT3 514 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 LACRTQ9GZZ8 138 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 TMEM134Q9H6X4 195 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 ERAP1Q9NZ08 941 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 APEX2Q9UBZ4 518 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 DNAJC12Q9UKB3 198 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 TFR2Q9UP52 801 aa17.6■□□□□ 0.41
SNRNP35-204ENST00000527158 PLXNB2O15031 1838 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 SLC15A5A6NIM6 579 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 RBAK-RBAKDNI3L0D1 243 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 PMM2O15305 246 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 HBP1O60381 514 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 ADRB2P07550 413 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 MXD4Q14582 209 aaPredicted RBP17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 BRD3Q15059 726 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 SLFN12LQ6IEE8 588 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 GJB7Q6PEY0 223 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 RASAL3Q86YV0 1011 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 TMC2Q8TDI7 906 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 PRPF31Q8WWY3 499 aaKnown RBP17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 CCDC127Q96BQ5 260 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 MAML3Q96JK9 1138 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 MFSD14AQ96MC6 490 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 NAPGQ99747 312 aaPredicted RBP17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 ARFGAP3Q9NP61 516 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 RCCD1A6NED2 376 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 ADCY3O60266 1144 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 SNAI1O95863 264 aaPredicted RBP17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 FERP16591 822 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 MXI1P50539 228 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 SLC18A3Q16572 532 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 C1orf220Q5T0J3 134 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 PARD3BQ8TEW8 1205 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 PSPC1Q8WXF1 523 aaKnown RBP17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 ZCCHC17Q9NP64 241 aaKnown RBP17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 CPA4Q9UI42 421 aa17.59■□□□□ 0.41
SNRNP35-204ENST00000527158 ZNF233A6NK53 670 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 CCDC172P0C7W6 258 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 PRKCIP41743 596 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 EFNA5P52803 228 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 ENPEPQ07075 957 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 CAPSQ13938 189 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 VPS36Q86VN1 386 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 PPTC7Q8NI37 304 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 PLEKHO2Q8TD55 490 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 EMID1Q96A84 441 aaPredicted RBP17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 FAM213AQ9BRX8 229 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 STYXL1Q9Y6J8 313 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 MCM3APO60318 1980 aa17.58■□□□□ 0.4
SNRNP35-204ENST00000527158 IGKV6-21A0A0C4DH24 114 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 CCDC151A5D8V7 595 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 ZBTB42B2RXF5 422 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 EXTL3O43909 919 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 PIGRP01833 764 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 ANXA13P27216 316 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 ADCYAP1R1P41586 468 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 PTK2Q05397 1052 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 CYP24A1Q07973 514 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 CC2D1AQ6P1N0 951 aaPredicted RBP17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 SRGAP1Q7Z6B7 1085 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 LMO3Q8TAP4 145 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 SECISBP2LQ93073 1101 aaKnown RBP17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 VTI1AQ96AJ9 217 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 TINF2Q9BSI4 451 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 KATNBL1Q9H079 304 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 TMEM117Q9H0C3 514 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 ABHD16BQ9H3Z7 469 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 ADAMTS1Q9UHI8 967 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 AJAP1Q9UKB5 411 aaPredicted RBP17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 GTF2H1P32780 548 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 SOX5P35711 763 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 DRP2Q13474 957 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 DRAP1Q14919 205 aaPredicted RBP17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 TAF1CQ15572 869 aaPredicted RBP17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 EPC2Q52LR7 807 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 GJC2Q5T442 439 aaPredicted RBP17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 KRT39Q6A163 491 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 RGMBQ6NW40 437 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 CDC23Q9UJX2 597 aa17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 AGO2Q9UKV8 859 aaKnown RBP17.57■□□□□ 0.4
SNRNP35-204ENST00000527158 PLXNA1Q9UIW2 1896 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 MACROD2A1Z1Q3 448 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 F8VZ95 297 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 LDHAP00338 332 aaKnown RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 PLA2G4AP47712 749 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 LAMTOR4Q0VGL1 99 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 C10orf76Q5T2E6 689 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 PHLDB3Q6NSJ2 640 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 ZBTB8OSQ8IWT0 167 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 MSL3Q8N5Y2 521 aaKnown RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 TMEM8AQ9HCN3 771 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 DUSP10Q9Y6W6 482 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 A0A087X0T9 212 aa17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 LRRIQ3A6PVS8 624 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-204ENST00000527158 IGF2BP3O00425 579 aaKnown RBP eCLIP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms