RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 RBM8AQ9Y5S9 174 aaKnown RBP12.13□□□□□ -0.47
CTSB-212ENST00000526645 FAM170BA6NMN3 283 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 TGM5O43548 720 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 GAS2O43903 313 aaKnown RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 FOXD2O60548 495 aaPredicted RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 ZMYND10O75800 440 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 CIITAP33076 1130 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 NRLP54845 237 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 DMWDQ09019 674 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 DRP2Q13474 957 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 PPP2R5DQ14738 602 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 SLC44A4Q53GD3 710 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 PRR16Q569H4 304 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 JAKMIP3Q5VZ66 844 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 LAIR1Q6GTX8 287 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 APOA5Q6Q788 366 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 RAB11FIP4Q86YS3 637 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 RHPN2Q8IUC4 686 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 CCDC12Q8WUD4 166 aaPredicted RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 FGF14Q92915 247 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 CLDN23Q96B33 292 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 RIT2Q99578 217 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 IER2Q9BTL4 223 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 NIFKQ9BYG3 293 aaKnown RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 MRPS17Q9Y2R5 130 aaKnown RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 PRG3Q9Y2Y8 225 aaPredicted RBP12.12□□□□□ -0.47
CTSB-212ENST00000526645 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 SPTBN2O15020 2390 aa12.12□□□□□ -0.47
CTSB-212ENST00000526645 POMCP01189 267 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 HNRNPA1P09651 372 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTSB-212ENST00000526645 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
CTSB-212ENST00000526645 NCLP19338 710 aaKnown RBP12.11□□□□□ -0.47
CTSB-212ENST00000526645 OR1G1P47890 313 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 DSC1Q08554 894 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 FUT2Q10981 343 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 UGCGQ16739 394 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 RTN1Q16799 776 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 MTERF2Q49AM1 385 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 LILRA6Q6PI73 481 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 PARM1Q6UWI2 310 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 COLGALT2Q8IYK4 626 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 MBOAT7Q96N66 472 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 PARD6AQ9NPB6 346 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 SUCLA2Q9P2R7 463 aaPredicted RBP12.11□□□□□ -0.47
CTSB-212ENST00000526645 CHD8Q9HCK8 2581 aa12.11□□□□□ -0.47
CTSB-212ENST00000526645 GAS7O60861 476 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
CTSB-212ENST00000526645 SPATA31D3P0C874 917 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 HOXA9P31269 272 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 USP41Q3LFD5 358 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 LIN9Q5TKA1 542 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 SPATA31D4Q6ZUB0 917 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 TAS1R1Q7RTX1 841 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 SRGAP1Q7Z6B7 1085 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 PALB2Q86YC2 1186 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 EXOC6Q8TAG9 804 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 LENG9Q96B70 501 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 CEP89Q96ST8 783 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 PHF20Q9BVI0 1012 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 COLEC11Q9BWP8 271 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 ZMYND12Q9H0C1 365 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 ANGPTL2Q9UKU9 493 aa12.1□□□□□ -0.47
CTSB-212ENST00000526645 V9GY48 417 aaPredicted RBP12.1□□□□□ -0.47
CTSB-212ENST00000526645 CFAP47Q6ZTR5 3102 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 ZMYM2Q9UBW7 1377 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 ZBTB43O43298 467 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 CHMP2AO43633 222 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 XYLBO75191 536 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 RETP07949 1114 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 POU2F2P09086 479 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 MYBP10242 640 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 ITGA4P13612 1032 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 GNA11P29992 359 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 AFF1P51825 1210 aaKnown RBP12.09□□□□□ -0.47
CTSB-212ENST00000526645 RCAN1P53805 252 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 PCBP1Q15365 356 aaKnown RBP eCLIP12.09□□□□□ -0.47
CTSB-212ENST00000526645 LRCH2Q5VUJ6 765 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 FUT10Q6P4F1 479 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 ZNF852Q6ZMS4 543 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 TPRG1Q6ZUI0 275 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
CTSB-212ENST00000526645 EXOC8Q8IYI6 725 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
CTSB-212ENST00000526645 FGF13Q92913 245 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 RPP25Q9BUL9 199 aaKnown RBP12.09□□□□□ -0.47
CTSB-212ENST00000526645 IFT122Q9HBG6 1241 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 FBXW11Q9UKB1 542 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 MTF2Q9Y483 593 aaPredicted RBP12.09□□□□□ -0.47
CTSB-212ENST00000526645 COL4A3BPQ9Y5P4 624 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
CTSB-212ENST00000526645 TDRD15B5MCY1 1934 aaKnown RBP12.08□□□□□ -0.48
CTSB-212ENST00000526645 MSH4O15457 936 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms