RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 USTQ9Y2C2 406 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 CFAP69A5D8W1 941 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 LZTS3O60299 673 aaPredicted RBP13.13□□□□□ -0.31
FGFR1-227ENST00000526570 OSBPP22059 807 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 MARK3P27448 753 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 GARSP41250 739 aaKnown RBP13.13□□□□□ -0.31
FGFR1-227ENST00000526570 CACNB3P54284 484 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 DSG1Q02413 1049 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 GATAD2AQ86YP4 633 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 METTL13Q8N6R0 699 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
FGFR1-227ENST00000526570 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 UBE2OQ9C0C9 1292 aaKnown RBP13.13□□□□□ -0.31
FGFR1-227ENST00000526570 PARVGQ9HBI0 331 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 PI4KBQ9UBF8 816 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 PREX1Q8TCU6 1659 aa13.13□□□□□ -0.31
FGFR1-227ENST00000526570 EXOC1LA0A1B0GW35 172 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 ARFIP2P53365 341 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 HIC1Q14526 733 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 TSPAN18Q96SJ8 248 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 KANSL2Q9H9L4 492 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 ZNF277Q9NRM2 450 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 CPS1P31327 1500 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 TSC22D2O75157 780 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 H2AFZP0C0S5 128 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 HMOX2P30519 316 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 COPS2P61201 443 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 ZBED6P86452 979 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 PPIDQ08752 370 aaKnown RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 TRIM25Q14258 630 aaKnown RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 FAM102BQ5T8I3 360 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 ISCA1Q9BUE6 129 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 TCP11X1B4DZS4 312 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 GPSM2P81274 684 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 KRT31Q15323 416 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 APOBEC2Q9Y235 224 aaKnown RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 TOM1L1O75674 476 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 SEC24DO94855 1032 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 PRLP01236 227 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 PMS2P54278 862 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 UBXN2AP68543 259 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 NOA1Q8NC60 698 aaKnown RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 GIPC2Q8TF65 315 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 CCDC28BQ9BUN5 200 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 AMNQ9BXJ7 453 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 FAM96AQ9H5X1 160 aa13.12□□□□□ -0.31
FGFR1-227ENST00000526570 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
FGFR1-227ENST00000526570 ACSL3O95573 720 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 CRKP46108 304 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 PSEN1P49768 467 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 GPATCH4Q5T3I0 446 aaKnown RBP13.11□□□□□ -0.31
FGFR1-227ENST00000526570 STX12Q86Y82 276 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 SKA1Q96BD8 255 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 IPPQ9Y573 584 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 BTBD18B2RXH4 712 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 CCDC22O60826 627 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 CBX3Q13185 183 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 KCTD2Q14681 263 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 PLEKHA7Q6IQ23 1121 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 TAS2R42Q7RTR8 314 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
FGFR1-227ENST00000526570 NOL6Q9H6R4 1146 aaKnown RBP13.11□□□□□ -0.31
FGFR1-227ENST00000526570 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 H3BRJ5 948 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 AP3B1O00203 1094 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 TTI1O43156 1089 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 IL12RB1P42701 662 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 YWHAGP61981 247 aaKnown RBP eCLIP13.11□□□□□ -0.31
FGFR1-227ENST00000526570 THOC7Q6I9Y2 204 aaKnown RBP13.11□□□□□ -0.31
FGFR1-227ENST00000526570 GPR141Q7Z602 305 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 TRIM59Q8IWR1 403 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 SIX6OS1Q8N1H7 587 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 CCSER2Q9H7U1 834 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 CPDO75976 1380 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
FGFR1-227ENST00000526570 SPATA31A5Q5VU36 1347 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 SPATA31A7Q8IWB4 1347 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 RPS6KA5O75582 802 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 ARHGDIAP52565 204 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 UBE3AQ05086 875 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 ARMC3Q5W041 872 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 SLFN12Q8IYM2 578 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 RABL2AQ9UBK7 228 aaPredicted RBP13.11□□□□□ -0.31
FGFR1-227ENST00000526570 PCDHA12Q9UN75 941 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 ZNF185O15231 689 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 GNA14O95837 355 aa13.11□□□□□ -0.31
FGFR1-227ENST00000526570 TRIP10Q15642 601 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms