RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 ATG2AQ2TAZ0 1938 aa13.56□□□□□ -0.24
CTTN-210ENST00000525852 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 A0A1W2PQ27 194 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 A0A1W2PQ64 194 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 A0A1W2PQD8 194 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 LPXNO60711 386 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 NPTXRO95502 500 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 SKIP12755 728 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 NDUFA8P51970 172 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 TMEM132AQ24JP5 1023 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 SLC27A1Q6PCB7 646 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 AGMOQ6ZNB7 445 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 LRRC55Q6ZSA7 311 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 FIBCD1Q8N539 461 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 FSIP1Q8NA03 581 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 HELQQ8TDG4 1101 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 GDPD5Q8WTR4 605 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 TNMDQ9H2S6 317 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 SERTAD1Q9UHV2 236 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 HES2Q9Y543 173 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 IPPQ9Y573 584 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 TRAK2O60296 914 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 CASP1P29466 404 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 NMT1P30419 496 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 AFF1P51825 1210 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 ATF7IP2Q5U623 682 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 HAUS6Q7Z4H7 955 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 TMEM192Q8IY95 271 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 MRPS27Q92552 414 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 CLP1Q92989 425 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 TRIM9Q9C026 710 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 TMEM117Q9H0C3 514 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
CTTN-210ENST00000525852 KCNG1Q9UIX4 513 aa13.55□□□□□ -0.24
CTTN-210ENST00000525852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
CTTN-210ENST00000525852 K7ENM7 598 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 N4BP3O15049 544 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 HOXA2O43364 376 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 SLC34A2O95436 690 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 SLFN14P0C7P3 912 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 IDEP14735 1019 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 FAM178BQ8IXR5 827 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 IPO9Q96P70 1041 aaKnown RBP13.54□□□□□ -0.24
CTTN-210ENST00000525852 TARS2Q9BW92 718 aaKnown RBP13.54□□□□□ -0.24
CTTN-210ENST00000525852 MRPL4Q9BYD3 311 aaKnown RBP13.54□□□□□ -0.24
CTTN-210ENST00000525852 MAGEF1Q9HAY2 307 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 PTPRHQ9HD43 1115 aa13.54□□□□□ -0.24
CTTN-210ENST00000525852 TYW1Q9NV66 732 aaKnown RBP13.54□□□□□ -0.24
CTTN-210ENST00000525852 TRIP11Q15643 1979 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 PLXNA4Q9HCM2 1894 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 H0YCG3 227 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 ABLIM1O14639 778 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 OFD1O75665 1012 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 ITGA4P13612 1032 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 FOSL2P15408 326 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 GAP43P17677 238 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 CTNNB1P35222 781 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 SYKP43405 635 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 AFMP43652 599 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 AMPD3Q01432 767 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 STRN3Q13033 797 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 ZC2HC1CQ53FD0 456 aaPredicted RBP13.53□□□□□ -0.24
CTTN-210ENST00000525852 HERC4Q5GLZ8 1057 aaPredicted RBP13.53□□□□□ -0.24
CTTN-210ENST00000525852 CNNM4Q6P4Q7 775 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 CEP57L1Q8IYX8 460 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 ABI1Q8IZP0 508 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 CNNM3Q8NE01 707 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 FBXO22Q8NEZ5 403 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 KCNN1Q92952 543 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 PGBD4Q96DM1 585 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 PAGE5Q96GU1 130 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 ZBTB45Q96K62 511 aaPredicted RBP13.53□□□□□ -0.24
CTTN-210ENST00000525852 C7orf25Q9BPX7 421 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
CTTN-210ENST00000525852 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 FGFBP2Q9BYJ0 223 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 TRIM6Q9C030 488 aaPredicted RBP13.53□□□□□ -0.24
CTTN-210ENST00000525852 LRRC27Q9C0I9 530 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 BLZF1Q9H2G9 400 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 CWH43Q9H720 699 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 PANK4Q9NVE7 773 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 TBC1D7Q9P0N9 293 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 TNFSF13BQ9Y275 285 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 INPP5FQ9Y2H2 1132 aa13.53□□□□□ -0.24
CTTN-210ENST00000525852 B4GALT3O60512 393 aa13.52□□□□□ -0.25
CTTN-210ENST00000525852 IGFBP4P22692 258 aa13.52□□□□□ -0.25
CTTN-210ENST00000525852 PROZP22891 400 aa13.52□□□□□ -0.25
CTTN-210ENST00000525852 AKAP5P24588 427 aa13.52□□□□□ -0.25
CTTN-210ENST00000525852 BMPR1AP36894 532 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms