RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 CATSPERGQ6ZRH7 1159 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 CPLX4Q7Z7G2 160 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 ASNSD1Q9NWL6 643 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 IGSF9BQ9UPX0 1349 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 IRX5P78411 483 aaPredicted RBP18.23■□□□□ 0.51
BEST1-203ENST00000524877 SGO2Q562F6 1265 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 POLR3CQ9BUI4 534 aaPredicted RBP18.23■□□□□ 0.51
BEST1-203ENST00000524877 INTS2Q9H0H0 1204 aaKnown RBP18.23■□□□□ 0.51
BEST1-203ENST00000524877 AMHP03971 560 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 ZBTB16Q05516 673 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 A6NNZ2 444 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 NMT1P30419 496 aaKnown RBP18.23■□□□□ 0.51
BEST1-203ENST00000524877 ALDH5A1P51649 535 aaPredicted RBP18.23■□□□□ 0.51
BEST1-203ENST00000524877 TUBB8Q3ZCM7 444 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 CEP85LQ5SZL2 805 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 ARFGAP2Q8N6H7 521 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 SYTL5Q8TDW5 730 aaPredicted RBP18.23■□□□□ 0.51
BEST1-203ENST00000524877 CALN1Q9BXU9 219 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 TGFB3P10600 412 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 ATF2P15336 505 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 RBL2Q08999 1139 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 MOXD1Q6UVY6 613 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 ARHGEF18Q6ZSZ5 1173 aa18.23■□□□□ 0.51
BEST1-203ENST00000524877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.23■□□□□ 0.51
BEST1-203ENST00000524877 SGK1O00141 431 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 S100BP04271 92 aaPredicted RBP18.22■□□□□ 0.51
BEST1-203ENST00000524877 DEFB128Q7Z7B8 93 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 PHLDB2Q86SQ0 1253 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.22■□□□□ 0.51
BEST1-203ENST00000524877 HSPBP1Q9NZL4 362 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 IRF6O14896 467 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 LRG1P02750 347 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 SLC8A1P32418 973 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 SNRPFP62306 86 aaKnown RBP18.22■□□□□ 0.51
BEST1-203ENST00000524877 RIOX2Q8IUF8 465 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 HVCN1Q96D96 273 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 CCSER1Q9C0I3 900 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 SAMSN1Q9NSI8 373 aaKnown RBP18.22■□□□□ 0.51
BEST1-203ENST00000524877 AFG3L2Q9Y4W6 797 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 SAR1BQ9Y6B6 198 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 NFIBO00712 420 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 SART1O43290 800 aaKnown RBP18.22■□□□□ 0.51
BEST1-203ENST00000524877 SMIM24O75264 130 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 IQSEC1Q6DN90 963 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 PDXKO00764 312 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 MSH4O15457 936 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 PTPROQ16827 1216 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 GUF1Q8N442 669 aaKnown RBP18.22■□□□□ 0.51
BEST1-203ENST00000524877 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 NKX2-3Q8TAU0 364 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 MORC4Q8TE76 937 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
BEST1-203ENST00000524877 SLC16A3O15427 465 aaKnown RBP18.21■□□□□ 0.51
BEST1-203ENST00000524877 ZBED6P86452 979 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 MFSD10Q14728 455 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 CAPNS2Q96L46 248 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 UBN1Q9NPG3 1134 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 NDUFAB1O14561 156 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 GNA15P30679 374 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 SREBF1P36956 1147 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 PARD3BQ8TEW8 1205 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 SEPT5Q99719 369 aaPredicted RBP18.21■□□□□ 0.51
BEST1-203ENST00000524877 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 FXR2P51116 673 aaKnown RBP eCLIP18.21■□□□□ 0.51
BEST1-203ENST00000524877 DARS2Q6PI48 645 aaKnown RBP18.21■□□□□ 0.51
BEST1-203ENST00000524877 CTAGE3PQ8IX95 158 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.21■□□□□ 0.51
BEST1-203ENST00000524877 CCDC110Q8TBZ0 833 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 APBA2Q99767 749 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 PCDHB12Q9Y5F1 795 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 ANKRD26Q9UPS8 1709 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 LUC7L3O95232 432 aaKnown RBP18.21■□□□□ 0.51
BEST1-203ENST00000524877 PGM5Q15124 567 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 FSCN1Q16658 493 aaKnown RBP18.21■□□□□ 0.51
BEST1-203ENST00000524877 C11orf57Q6ZUT1 292 aaPredicted RBP18.21■□□□□ 0.51
BEST1-203ENST00000524877 ANKRD23Q86SG2 305 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 ADAM22Q9P0K1 906 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 PPME1Q9Y570 386 aa18.21■□□□□ 0.51
BEST1-203ENST00000524877 GARSP41250 739 aaKnown RBP18.21■□□□□ 0.5
BEST1-203ENST00000524877 MTMR3Q13615 1198 aa18.21■□□□□ 0.5
BEST1-203ENST00000524877 HSPH1Q92598 858 aa18.21■□□□□ 0.5
BEST1-203ENST00000524877 SH2D3AQ9BRG2 576 aa18.21■□□□□ 0.5
BEST1-203ENST00000524877 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.5
BEST1-203ENST00000524877 ZNF286BP0CG31 522 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 STILQ15468 1287 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 CEP72Q9P209 647 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 LTN1O94822 1766 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 PNPLA4P41247 253 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 ZFPM1Q8IX07 1006 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 FBXL13Q8NEE6 735 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 SLC4A1P02730 911 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 RPA1P27694 616 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 CERS5Q8N5B7 392 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 C17orf75Q9HAS0 396 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 CDC25BP30305 580 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 PRCPP42785 496 aa18.2■□□□□ 0.5
BEST1-203ENST00000524877 KCNH2Q12809 1159 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms