RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 APBB1IPQ7Z5R6 666 aaPredicted RBP18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 HACE1Q8IYU2 909 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 ABI1Q8IZP0 508 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 MYCT1Q8N699 235 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 CPB2Q96IY4 423 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 CHAMP1Q96JM3 812 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 ADPGKQ9BRR6 497 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 ZHX3Q9H4I2 956 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 RNF19AQ9NV58 838 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 LMCD1Q9NZU5 365 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 SEL1LQ9UBV2 794 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 USP25Q9UHP3 1055 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 KCNH3Q9ULD8 1083 aa18.27■□□□□ 0.52
CSGALNACT1-216ENST00000524213 CNTNAP2Q9UHC6 1331 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 A0A1B0GUA9 196 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MYMKA6NI61 221 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TBKBP1A7MCY6 615 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 C5orf67F2Z3F1 127 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 SLC16A4O15374 487 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 POLR2DO15514 142 aaKnown RBP18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TRAK2O60296 914 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 LIG1P18858 919 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 STRN3Q13033 797 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 SLC27A1Q6PCB7 646 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 ZNF598Q86UK7 904 aaKnown RBP18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 CEP57L1Q8IYX8 460 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 KCNN1Q92952 543 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 KIFC3Q9BVG8 833 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TRIM6Q9C030 488 aaPredicted RBP18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TMEM117Q9H0C3 514 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 KBTBD4Q9NVX7 518 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 PCDHB2Q9Y5E7 798 aa18.26■□□□□ 0.51
CSGALNACT1-216ENST00000524213 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 B4GALT5O43286 388 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 RB1P06400 928 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MAPTP10636 758 aaKnown RBP18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 ATF7P17544 494 aaPredicted RBP18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 GAP43P17677 238 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 NCKAP1LP55160 1127 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 SKIV2LQ15477 1246 aaKnown RBP18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 UBXN11Q5T124 520 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MRPL10Q7Z7H8 261 aaKnown RBP18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 RNF169Q8NCN4 708 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MRPL38Q96DV4 380 aaKnown RBP18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MRPL4Q9BYD3 311 aaKnown RBP18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 UBN1Q9NPG3 1134 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 HCSTQ9UBK5 93 aa18.25■□□□□ 0.51
CSGALNACT1-216ENST00000524213 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 GRM6O15303 877 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 PFKFB1P16118 471 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 CLLU1OSQ5K130 101 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 HAUS6Q7Z4H7 955 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 FAM178BQ8IXR5 827 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 CCDC65Q8IXS2 484 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TMEM161BQ8NDZ6 487 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MRPS27Q92552 414 aaKnown RBP18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 DNAJC19Q96DA6 116 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 CASD1Q96PB1 797 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 C11orf84Q9BUA3 381 aaPredicted RBP18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MRPL9Q9BYD2 267 aaKnown RBP18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 GDPD2Q9HCC8 539 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 THEGQ9P2T0 379 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 HPSEQ9Y251 543 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MYO7AQ13402 2215 aa18.24■□□□□ 0.51
CSGALNACT1-216ENST00000524213 MYH11P35749 1972 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 A0A1B0GVL5 298 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 K7ENM7 598 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 NPTXRO95502 500 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 ITGA4P13612 1032 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 IDEP14735 1019 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 SYKP43405 635 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 PTPROQ16827 1216 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 DCAF4L1Q3SXM0 396 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 ATF7IP2Q5U623 682 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 GLB1LQ6UWU2 654 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 RSAD1Q9HA92 442 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 AAASQ9NRG9 546 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TYW1Q9NV66 732 aaKnown RBP18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TNFSF13BQ9Y275 285 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 IPPQ9Y573 584 aa18.23■□□□□ 0.51
CSGALNACT1-216ENST00000524213 XIRP2A4UGR9 3374 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 CARNS1A5YM72 827 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 SLFN14P0C7P3 912 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 LONRF3Q496Y0 759 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 SPOUT1Q5T280 376 aaKnown RBP18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 CNNM4Q6P4Q7 775 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 LRRC55Q6ZSA7 311 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 TAS1R3Q7RTX0 852 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 LRRC43Q8N309 656 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 FSIP1Q8NA03 581 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 SMG8Q8ND04 991 aaKnown RBP18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 HELQQ8TDG4 1101 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 LPPQ93052 612 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 P2RX5Q93086 422 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 HVCN1Q96D96 273 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 CCDC34Q96HJ3 373 aa18.22■□□□□ 0.51
CSGALNACT1-216ENST00000524213 IPO9Q96P70 1041 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms