RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SLC6A15Q9H2J7 730 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 C12orf65Q9H3J6 166 aaKnown RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 DMRT3Q9NQL9 472 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 KMT5AQ9NQR1 393 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 TLR9Q9NR96 1032 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 PUF60Q9UHX1 559 aaKnown RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 CTDP1Q9Y5B0 961 aaPredicted RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 C2orf78A6NCI8 922 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
SKP1-212ENST00000523966 TOX4O94842 621 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 SASH1O94885 1247 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 VSIG10L2P0DP72 767 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 GYPEP15421 78 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 LPOP22079 712 aaPredicted RBP5.01□□□□□ -1.61
SKP1-212ENST00000523966 RAC3P60763 192 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 SURF1Q15526 300 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 ZNF827Q17R98 1081 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 PGS1Q32NB8 556 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 NT5DC1Q5TFE4 455 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 ABHD15Q6UXT9 468 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 EPM2AIP1Q7L775 607 aaPredicted RBP5.01□□□□□ -1.61
SKP1-212ENST00000523966 CATIPQ7Z7H3 387 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 DRC7Q8IY82 874 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 LGI4Q8N135 537 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 ANKRD53Q8N9V6 530 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 PIK3C3Q8NEB9 887 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 OR5M3Q8NGP4 307 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 SLC35G2Q8TBE7 412 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 C1GALT1C1Q96EU7 318 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 MVB12AQ96EY5 273 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 CYFIP2Q96F07 1278 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 RPL10LQ96L21 214 aaKnown RBP5.01□□□□□ -1.61
SKP1-212ENST00000523966 CDC5LQ99459 802 aaKnown RBP5.01□□□□□ -1.61
SKP1-212ENST00000523966 EPC1Q9H2F5 836 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 C1orf112Q9NSG2 853 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 TDP1Q9NUW8 608 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 ING3Q9NXR8 418 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 PTPN22Q9Y2R2 807 aa5.01□□□□□ -1.61
SKP1-212ENST00000523966 CFAP20Q9Y6A4 193 aaKnown RBP5.01□□□□□ -1.61
SKP1-212ENST00000523966 PRPF3O43395 683 aaKnown RBP5□□□□□ -1.61
SKP1-212ENST00000523966 PLIN1O60240 522 aa5□□□□□ -1.61
SKP1-212ENST00000523966 GASTP01350 101 aa5□□□□□ -1.61
SKP1-212ENST00000523966 C8AP07357 584 aa5□□□□□ -1.61
SKP1-212ENST00000523966 NPEPPSP55786 919 aa5□□□□□ -1.61
SKP1-212ENST00000523966 GAGE13Q4V321 117 aa5□□□□□ -1.61
SKP1-212ENST00000523966 ATAT1Q5SQI0 421 aa5□□□□□ -1.61
SKP1-212ENST00000523966 LILRA6Q6PI73 481 aa5□□□□□ -1.61
SKP1-212ENST00000523966 LRRC56Q8IYG6 542 aaPredicted RBP5□□□□□ -1.61
SKP1-212ENST00000523966 PQLC1Q8N2U9 271 aa5□□□□□ -1.61
SKP1-212ENST00000523966 TP53I13Q8NBR0 393 aaPredicted RBP5□□□□□ -1.61
SKP1-212ENST00000523966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5□□□□□ -1.615e-16■□□□□ 9.1
SKP1-212ENST00000523966 HPS3Q969F9 1004 aa5□□□□□ -1.61
SKP1-212ENST00000523966 ARL8AQ96BM9 186 aa5□□□□□ -1.61
SKP1-212ENST00000523966 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
SKP1-212ENST00000523966 GTPBP4Q9BZE4 634 aaKnown RBP5□□□□□ -1.61
SKP1-212ENST00000523966 SENP6Q9GZR1 1112 aaPredicted RBP5□□□□□ -1.61
SKP1-212ENST00000523966 BCO1Q9HAY6 547 aa5□□□□□ -1.61
SKP1-212ENST00000523966 MAN1C1Q9NR34 630 aa5□□□□□ -1.61
SKP1-212ENST00000523966 TMEM140Q9NV12 185 aa5□□□□□ -1.61
SKP1-212ENST00000523966 OBP2AQ9NY56 170 aa5□□□□□ -1.61
SKP1-212ENST00000523966 GPRC5DQ9NZD1 345 aa5□□□□□ -1.61
SKP1-212ENST00000523966 SCOCQ9UIL1 159 aa5□□□□□ -1.61
SKP1-212ENST00000523966 SERPINB13Q9UIV8 391 aa5□□□□□ -1.61
SKP1-212ENST00000523966 LIMCH1Q9UPQ0 1083 aa5□□□□□ -1.61
SKP1-212ENST00000523966 PCDHA13Q9Y5I0 950 aa5□□□□□ -1.61
SKP1-212ENST00000523966 FRMPD2Q68DX3 1309 aaPredicted RBP4.99□□□□□ -1.61
SKP1-212ENST00000523966 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 MTSS1O43312 755 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 TMEM127O75204 238 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 CRHR1P34998 444 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 PTPN7P35236 360 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 ADCY7P51828 1080 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 TBX4P57082 545 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 PPP3CAQ08209 521 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 IL10RAQ13651 578 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 NFYCQ13952 458 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 ATP2B3Q16720 1220 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 GADL1Q6ZQY3 521 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 DGKHQ86XP1 1220 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 KRTAP1-3Q8IUG1 177 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 CCDC146Q8IYE0 955 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 CMTM4Q8IZR5 234 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 MSL3Q8N5Y2 521 aaKnown RBP4.99□□□□□ -1.61
SKP1-212ENST00000523966 MARCH10Q8NA82 808 aaPredicted RBP4.99□□□□□ -1.61
SKP1-212ENST00000523966 OR7D4Q8NG98 312 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 CCHCR1Q8TD31 782 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 RABGGTAQ92696 567 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 FAM204AQ9H8W3 233 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 ANLNQ9NQW6 1124 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 LANCL2Q9NS86 450 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.99□□□□□ -1.61
SKP1-212ENST00000523966 POLHQ9Y253 713 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 IPPQ9Y573 584 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 SLC4A7Q9Y6M7 1214 aa4.99□□□□□ -1.61
SKP1-212ENST00000523966 DBX1A6NMT0 343 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 SLC16A6O15403 523 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 NOBOXO60393 691 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 ITGA10O75578 1167 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 ARIH2O95376 493 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 MYL1P05976 194 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms