RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	CLC	Q05315	142 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	CCDC6	Q16204	474 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	NFE2L2	Q16236	605 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	CCDC184	Q52MB2	194 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	UNQ6494/PRO21346	Q6UXR6	183 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	LBX2	Q6XYB7	198 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	PDILT	Q8N807	584 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	DTWD2	Q8NBA8	298 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	C1orf131	Q8NDD1	294 aa	Known RBP	6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	OR6P1	Q8NGX9	317 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	RPGRIP1	Q96KN7	1286 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	FERD3L	Q96RJ6	166 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	METTL22	Q9BUU2	404 aa	Predicted RBP	6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	SRRT	Q9BXP5	876 aa	Known RBP	6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	UPF3A	Q9H1J1	476 aa	Known RBP	6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	FAM105A	Q9NUU6	356 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	FRMD4B	Q9Y2L6	1034 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	PRKAB1	Q9Y478	270 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	BSN	Q9UPA5	3926 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	ASTN1	O14525	1302 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	TTC36	A6NLP5	189 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	MEIS3P2	A8K0S8	358 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636		K7ELQ4	463 aa	Predicted RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	PLIN1	O60240	522 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	GLP2R	O95838	553 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	PGR	P06401	933 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	PLCG1	P19174	1290 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	MAN1A1	P33908	653 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	GATA4	P43694	442 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	CCNA1	P78396	465 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	ADAM15	Q13444	863 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	EPC2	Q52LR7	807 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	GK5	Q6ZS86	529 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	CREBRF	Q8IUR6	639 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	HID1	Q8IV36	788 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	MRPL41	Q8IXM3	137 aa	Known RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	RAVER1	Q8IY67	606 aa	Known RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	ARMC10	Q8N2F6	343 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	TMEM151A	Q8N4L1	468 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	ZGPAT	Q8N5A5	531 aa	Known RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	TBC1D22A	Q8WUA7	517 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	UTP4	Q969X6	686 aa	Known RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	RELT	Q969Z4	430 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	RAD9A	Q99638	391 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	PHF7	Q9BWX1	381 aa	Predicted RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	INCENP	Q9NQS7	918 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	GMIP	Q9P107	970 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	REV1	Q9UBZ9	1251 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	PCOLCE2	Q9UKZ9	415 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	KNSTRN	Q9Y448	316 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	USP15	Q9Y4E8	981 aa	Predicted RBP	6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636	MGA	Q8IWI9	3026 aa		6.07	□□□□□ -1.44
PABPC1-223	ENST00000523636		H3BNC9	293 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	IFRD1	O00458	451 aa	Predicted RBP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CLGN	O14967	610 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	PPP1R12A	O14974	1030 aa	Predicted RBP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	DHX15	O43143	795 aa	Known RBP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	NRDC	O43847	1150 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	GDF11	O95390	407 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	SSB	P05455	408 aa	Known RBP eCLIP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	AOC1	P19801	751 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	PRDX5	P30044	214 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	GIPR	P48546	466 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	GJA9	P57773	515 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	NKX3-2	P78367	333 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	MAP7	Q14244	749 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	PLEKHG4	Q58EX7	1191 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	SLC6A19	Q695T7	634 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CDPF1	Q6NVV7	123 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CASC1	Q6TDU7	716 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CATSPERG	Q6ZRH7	1159 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	UBE3B	Q7Z3V4	1068 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	MCAT	Q8IVS2	390 aa	Known RBP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	FAM20C	Q8IXL6	584 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	KREMEN2	Q8NCW0	462 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	ENOX1	Q8TC92	643 aa	Known RBP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CPLX3	Q8WVH0	158 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	RIN2	Q8WYP3	895 aa	Predicted RBP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	SUSD6	Q92537	303 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	TSR2	Q969E8	191 aa	Known RBP	6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	ISL2	Q96A47	359 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	SHD	Q96IW2	340 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	PLEKHF1	Q96S99	279 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	TSPAN18	Q96SJ8	248 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CRBN	Q96SW2	442 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	ARPC5L	Q9BPX5	153 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CASS4	Q9NQ75	786 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	HYPK	Q9NX55	129 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	TMOD4	Q9NZQ9	345 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	PPT2	Q9UMR5	302 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	WASF3	Q9UPY6	502 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	NUB1	Q9Y5A7	615 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	CORIN	Q9Y5Q5	1042 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	FLNC	Q14315	2725 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	SCN10A	Q9Y5Y9	1956 aa		6.06	□□□□□ -1.44
PABPC1-223	ENST00000523636	KIF16B	Q96L93	1317 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	UTP20	O75691	2785 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	PRR5-ARHGAP8	B1AHC4	643 aa		6.05	□□□□□ -1.44

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