RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 PICK1Q9NRD5 415 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 USH1CQ9Y6N9 552 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 A0A087X0T9 212 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 FAM228BP0C875 321 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 IFI35P80217 286 aaPredicted RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 RAPGEF1Q13905 1077 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 BMT2Q1RMZ1 405 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 SLC9C1Q4G0N8 1177 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 TMC4Q7Z404 712 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 MAML1Q92585 1016 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 DDX27Q96GQ7 796 aaKnown RBP9□□□□□ -0.97
CSMD1-213ENST00000523488 TSPAN18Q96SJ8 248 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 BRIP1Q9BX63 1249 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.97
CSMD1-213ENST00000523488 WHRNQ9P202 907 aa9□□□□□ -0.97
CSMD1-213ENST00000523488 PCDH11YQ9BZA8 1340 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 TRIM64CA6NLI5 447 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 PDE8AO60658 829 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 MAGEC1O60732 1142 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 ATP6V1G1O75348 118 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 GCAP28676 217 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 PTPN4P29074 926 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 RCN2Q14257 317 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 EPM2AIP1Q7L775 607 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-213ENST00000523488 TAOK1Q7L7X3 1001 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 KBTBD2Q8IY47 623 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 SYCE1Q8N0S2 351 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 TIMMDC1Q9NPL8 285 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 NUMBLQ9Y6R0 609 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 FNDC1Q4ZHG4 1894 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-213ENST00000523488 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 RGL2O15211 777 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 ATP5BP06576 529 aaKnown RBP8.99□□□□□ -0.97
CSMD1-213ENST00000523488 SMIM18P0DKX4 95 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 RRP1BQ14684 758 aaKnown RBP8.99□□□□□ -0.97
CSMD1-213ENST00000523488 WTAPQ15007 396 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 LIN52Q52LA3 116 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 SH2D4BQ5SQS7 431 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 FAM83BQ5T0W9 1011 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 ACAD11Q709F0 780 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 ENAHQ8N8S7 591 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-213ENST00000523488 ZBTB8BQ8NAP8 495 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-213ENST00000523488 SUPT20HQ8NEM7 779 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 MORC4Q8TE76 937 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 PLIN2Q99541 437 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 RMI1Q9H9A7 625 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 GALNT8Q9NY28 637 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 NAGPAQ9UK23 515 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 PFASO15067 1338 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 ZNF532Q9HCE3 1301 aa8.99□□□□□ -0.97
CSMD1-213ENST00000523488 hCG_2014768A0A024R1R8 64 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 PODXLO00592 558 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 PEX1O43933 1283 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 PHF2O75151 1096 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 FGFR1OPO95684 399 aaKnown RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 GSTT1P30711 240 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TXKP42681 527 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 PRPF4BQ13523 1007 aaKnown RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SLC4A8Q2Y0W8 1093 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 EDRF1Q3B7T1 1238 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 KIAA1755Q5JYT7 1200 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TMCO4Q5TGY1 634 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SMYD5Q6GMV2 418 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 DAAM2Q86T65 1068 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 ZC3H18Q86VM9 953 aaKnown RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 ZDHHC14Q8IZN3 488 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 UCMAQ8WVF2 138 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SKA1Q96BD8 255 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 ZKSCAN3Q9BRR0 538 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 DHRS4Q9BTZ2 278 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TBC1D10AQ9BXI6 508 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 GPR88Q9GZN0 384 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 AZI2Q9H6S1 392 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TCP11L1Q9NUJ3 509 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 FGFR1OP2Q9NVK5 253 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 RHBDL2Q9NX52 303 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TRIM33Q9UPN9 1127 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 EXOC3O60645 756 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 IDH1O75874 414 aaKnown RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TGDSO95455 350 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TTLL1O95922 423 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 UQCRFS1P1P0C7P4 283 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SLC5A1P13866 664 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 MCM7P33993 719 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 UBA7P41226 1012 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 SLCO1A2P46721 670 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 HPCAP84074 193 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TMEM259Q4ZIN3 620 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 KYAT3Q6YP21 454 aaKnown RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 PPP4R3CPQ6ZMV5 832 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TMEM126BQ8IUX1 230 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 ANKRD42Q8N9B4 389 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TTLL11Q8NHH1 800 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 DNAJC19Q96DA6 116 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 NAP1L3Q99457 506 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-213ENST00000523488 LRRC19Q9H756 370 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 PCDHA4Q9UN74 947 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 ESYT2A0FGR8 921 aa8.98□□□□□ -0.97
CSMD1-213ENST00000523488 TCP11X1B4DZS4 312 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms