RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 STAMQ92783 540 aa10.15□□□□□ -0.78
TRAPPC9-212ENST00000521944 GPATCH3Q96I76 525 aa10.15□□□□□ -0.78
TRAPPC9-212ENST00000521944 ADAMTS10Q9H324 1103 aa10.15□□□□□ -0.78
TRAPPC9-212ENST00000521944 DCTPP1Q9H773 170 aa10.15□□□□□ -0.78
TRAPPC9-212ENST00000521944 DNAJB4Q9UDY4 337 aa10.15□□□□□ -0.78
TRAPPC9-212ENST00000521944 TTC41PQ6P2S7 1318 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 IGKV6D-21A0A0A0MT36 114 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 PNMA6FA0A0J9YX94 578 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 B4E1Z4 1266 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 TEX28O15482 410 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 ATG7O95352 703 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 TOP3BO95985 862 aaKnown RBP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 SSBP05455 408 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 SPATA31D3P0C874 917 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 SPINK2P20155 84 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 ATP4AP20648 1035 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 RPS9P46781 194 aaKnown RBP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 SLC11A1P49279 550 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 ACTR2P61160 394 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 PRKCQQ04759 706 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 SOWAHCQ53LP3 525 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 ZBTB41Q5SVQ8 909 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 LYPD8Q6UX82 237 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 CYP26C1Q6V0L0 522 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 SPATA31D4Q6ZUB0 917 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 DDX1Q92499 740 aaKnown RBP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 SMG7Q92540 1137 aaKnown RBP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 MYL10Q9BUA6 226 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 FAM126AQ9BYI3 521 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 NT5C3AQ9H0P0 336 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 HELLSQ9NRZ9 838 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 TBC1D13Q9NVG8 400 aa10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAPPC9-212ENST00000521944 PIK3CDO00329 1044 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 KCNK5O95279 499 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 C22orf31O95567 290 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 EFEMP2O95967 443 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 MAGEA9P43362 315 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 AFF1P51825 1210 aaKnown RBP10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 LIMK1P53667 647 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 SRSF5Q13243 272 aaKnown RBP10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 SEC23AQ15436 765 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 MCMDC2Q4G0Z9 681 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 ODR4Q5SWX8 454 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 GET4Q7L5D6 327 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 IQCA1Q86XH1 822 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 ZNF280BQ86YH2 543 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 TSC1Q92574 1164 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 GATA6Q92908 595 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 LPPQ93052 612 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 EMILIN2Q9BXX0 1053 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 AZI2Q9H6S1 392 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 JPH1Q9HDC5 661 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 JADE2Q9NQC1 790 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 SLC9A2Q9UBY0 812 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 DDX19BQ9UMR2 479 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 MYO18BQ8IUG5 2567 aa10.13□□□□□ -0.79
TRAPPC9-212ENST00000521944 CACNA1EQ15878 2313 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 DDHD2O94830 711 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 CCNE2O96020 404 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 FGFR4P22455 802 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 HOXC13P31276 330 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 ITGB3BPQ13352 177 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 MTMR1Q13613 665 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 SF3A2Q15428 464 aaKnown RBP10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 CCDC6Q16204 474 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 LONRF3Q496Y0 759 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 IL31Q6EBC2 164 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 RSPO2Q6UXX9 243 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 PRR23BQ6ZRT6 265 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 LINC01465Q8N7H1 131 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 CDHR1Q96JP9 859 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 ZNF668Q96K58 619 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 LSM14BQ9BX40 385 aaKnown RBP10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 MRPL9Q9BYD2 267 aaKnown RBP10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 RNF41Q9H4P4 317 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 EVA1BQ9NVM1 165 aa10.12□□□□□ -0.79
TRAPPC9-212ENST00000521944 SALL3Q9BXA9 1300 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 C2CD2LO14523 706 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 GIPC1O14908 333 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 HBP1O60381 514 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 CSDE1O75534 798 aaKnown RBP10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 OFD1O75665 1012 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 ZSCAN20P17040 1043 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 EIF4BP23588 611 aaKnown RBP10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 NLRP11P59045 1033 aaKnown RBP10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 NTHL1P78549 312 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 SMARCC2Q8TAQ2 1214 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 RPS6KC1Q96S38 1066 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 RXFP1Q9HBX9 757 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 KCNH7Q9NS40 1196 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 RAB23Q9ULC3 237 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 NOTCH4Q99466 2003 aa10.11□□□□□ -0.79
TRAPPC9-212ENST00000521944 KALRNO60229 2985 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 MTCL1Q9Y4B5 1905 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 CLCN3P51790 818 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 ADCY1Q08828 1119 aa10.1□□□□□ -0.79
TRAPPC9-212ENST00000521944 KCNH2Q12809 1159 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms