RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 ALDH2P05091 517 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 PCP11498 1178 aaKnown RBP8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 HOXA9P31269 272 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 PIP4P1Q86T03 277 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 ITPRIPQ8IWB1 547 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 TMEFF1Q8IYR6 380 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 ZNF710Q8N1W2 664 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 CHCHD4Q8N4Q1 142 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 LPPQ93052 612 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 GBP3Q9H0R5 595 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 SLC32A1Q9H598 525 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 GDE1Q9NZC3 331 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 FAN1Q9Y2M0 1017 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 PIAS3Q9Y6X2 628 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 EVPLQ92817 2033 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 NOTCH4Q99466 2003 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 IGKV6D-21A0A0A0MT36 114 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 SPAARA0A1B0GVQ0 90 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 TRIM6-TRIM34B2RNG4 842 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 NRP1O14786 923 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 ATG7O95352 703 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 RLBP1P12271 317 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 FCARP24071 287 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 WDR44Q5JSH3 913 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 VPS53Q5VIR6 699 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 TANGO2Q6ICL3 276 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 PDXDC2PQ6P474 469 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 POTEHQ6S545 545 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 Q6ZS52 159 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 SIRT2Q8IXJ6 389 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 STAG2Q8N3U4 1231 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 DUSP15Q9H1R2 295 aaPredicted RBP8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 JADE2Q9NQC1 790 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 CHST12Q9NRB3 414 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 DKK4Q9UBT3 224 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 SLC9A2Q9UBY0 812 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 FBXW11Q9UKB1 542 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 UBIAD1Q9Y5Z9 338 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 URB1O60287 2271 aaKnown RBP8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 MEIS3P2A8K0S8 358 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 UPK3BL1B0FP48 263 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 UPK3BL2E5RIL1 263 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 MAFGO15525 162 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 ZNF623O75123 536 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 NTRK1P04629 796 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 RDXP35241 583 aaKnown RBP8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 NLRP11P59045 1033 aaKnown RBP8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 ACTR2P61160 394 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 SIM1P81133 766 aaPredicted RBP8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 SLC35G1Q2M3R5 365 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 LINC01465Q8N7H1 131 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 IRF7Q92985 503 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 MSANTD3Q96H12 275 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 KAT14Q9H8E8 782 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 BRD9Q9H8M2 597 aa8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 ZNF334Q9HCZ1 680 aaPredicted RBP8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 RBM12Q9NTZ6 932 aaKnown RBP8.65□□□□□ -1.02
HMBOX1-208ENST00000521516 A0A087WV48 116 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 CCDC192P0DO97 292 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 SKIP12755 728 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 DARSP14868 501 aaKnown RBP8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 MTMR1Q13613 665 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 ZNF423Q2M1K9 1284 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 CCDC178Q5BJE1 867 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 DGKKQ5KSL6 1271 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 C1orf228Q6PIY5 440 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 CCNI2Q6ZMN8 369 aaPredicted RBP8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 CRELD1Q96HD1 420 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 ZKSCAN3Q9BRR0 538 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 PKD2L1Q9P0L9 805 aa8.65□□□□□ -1.03
HMBOX1-208ENST00000521516 PIK3CDO00329 1044 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 HMMRO75330 724 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 CCNE1P24864 410 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 NT5C2P49902 561 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 TRMT61BQ9BVS5 477 aaKnown RBP8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 SHROOM3Q8TF72 1996 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 KLRF2D3W0D1 207 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 KHNYNO15037 678 aaKnown RBP8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 MAP3K13O43283 966 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 XYLBO75191 536 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 FGAP02671 866 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 CREB5Q02930 508 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 GRM2Q14416 872 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 MDM1Q8TC05 714 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 URGCPQ8TCY9 931 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 NFASCO94856 1347 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 ZMYM6O95789 1325 aa8.64□□□□□ -1.03
HMBOX1-208ENST00000521516 ARNTLO00327 626 aa8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 CCL16O15467 120 aa8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 RHOBTB1O94844 696 aa8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 FGFR4P22455 802 aa8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 CREMQ03060 361 aa8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 UAP1L1Q3KQV9 507 aa8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 PABPC1LQ4VXU2 614 aaKnown RBP8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 PPM1LQ5SGD2 360 aa8.63□□□□□ -1.03
HMBOX1-208ENST00000521516 MFSD6Q6ZSS7 791 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms