RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 HPS3Q969F9 1004 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 MBD6Q96DN6 1003 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 XYLT2Q9H1B5 865 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 OR10A2Q9H208 303 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 PTPN22Q9Y2R2 807 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 AKR1B10O60218 316 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 PRAMEF4O60810 478 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 PHF2O75151 1096 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 B3GNT9Q6UX72 402 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 USP30Q70CQ3 517 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 SYT8Q8NBV8 401 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 FEZF2Q8TBJ5 459 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 DPF2Q92785 391 aa8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 GCDHQ92947 438 aaPredicted RBP8.51□□□□□ -1.05
NUDCD1-204ENST00000521439 MROH6A6NGR9 719 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 OTOL1A6NHN0 477 aaPredicted RBP8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 FAM171A2A8MVW0 826 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 VSTM5A8MXK1 200 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 ERC2O15083 957 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 DTNBO60941 627 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 KIR2DL3P43628 341 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 CTSWP56202 376 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 RALYLQ86SE5 291 aaKnown RBP8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 HDAC10Q969S8 669 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 SLC7A6OSQ96CW6 309 aaPredicted RBP8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 PCGF6Q9BYE7 350 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 C14orf93Q9H972 538 aaKnown RBP8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 OBP2AQ9NY56 170 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 RCAN3Q9UKA8 241 aa8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 RBM8AQ9Y5S9 174 aaKnown RBP8.5□□□□□ -1.05
NUDCD1-204ENST00000521439 ALDH1A2O94788 518 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 ADSLP30566 484 aaPredicted RBP8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 GNALP38405 381 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 KIAA2012Q0VF49 1180 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 ZNF267Q14586 743 aaPredicted RBP8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 C3orf36Q3SXR2 165 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 LCE4AQ5TA78 99 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 MIGA2Q7L4E1 593 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 MSL3Q8N5Y2 521 aaKnown RBP8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 OR2I1PQ8NGU4 316 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 RUNDC1Q96C34 613 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 TAAR9Q96RI9 348 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 MAP3K14Q99558 947 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 PRDM11Q9NQV5 511 aa8.49□□□□□ -1.05
NUDCD1-204ENST00000521439 A0A0G2JLL6 359 aaPredicted RBP8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 WNT3AP56704 352 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 HLTFQ14527 1009 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 SEPT2Q15019 361 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 TBR1Q16650 682 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 ARHGAP29Q52LW3 1261 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 FAM124AQ86V42 546 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 DGKHQ86XP1 1220 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 KBTBD2Q8IY47 623 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 GRAMD1CQ8IYS0 662 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 HOXB13Q92826 284 aaPredicted RBP8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 MVB12AQ96EY5 273 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 C20orf173Q96LM9 149 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 C7orf25Q9BPX7 421 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 TLR9Q9NR96 1032 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 ING3Q9NXR8 418 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 RTEL1Q9NZ71 1219 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 GABBR1Q9UBS5 961 aa8.48□□□□□ -1.05
NUDCD1-204ENST00000521439 CTNND1O60716 968 aaKnown RBP8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 ENDOD1O94919 500 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 ECHS1P30084 290 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 FXR1P51114 621 aaKnown RBP eCLIP8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 MST1LQ2TV78 715 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 PGS1Q32NB8 556 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 Q6ZVL8 140 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 FRMD5Q7Z6J6 570 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 ZDHHC14Q8IZN3 488 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 DIS3LQ8TF46 1054 aaKnown RBP8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 SLC6A15Q9H2J7 730 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 JADE2Q9NQC1 790 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 USP40Q9NVE5 1235 aa8.47□□□□□ -1.05
NUDCD1-204ENST00000521439 ARHGAP6O43182 974 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 MTSS1O43312 755 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 CAND2O75155 1236 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 TOX4O94842 621 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 ADCY7P51828 1080 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 GJA9P57773 515 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 ATP2C1P98194 919 aaPredicted RBP8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 HGFACQ04756 655 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 IL10RAQ13651 578 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 NFYCQ13952 458 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 ZNF568Q3ZCX4 644 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 NT5DC1Q5TFE4 455 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 PPP4R3AQ6IN85 833 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 ZNF480Q8WV37 535 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 C1GALT1C1Q96EU7 318 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 C1orf112Q9NSG2 853 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 PCDHA13Q9Y5I0 950 aa8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 CFAP20Q9Y6A4 193 aaKnown RBP8.46□□□□□ -1.06
NUDCD1-204ENST00000521439 NOBOXO60393 691 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 JUNP05412 331 aaKnown RBP8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 VSIG10L2P0DP72 767 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 BPIFB4P59827 614 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 GBX1Q14549 363 aa8.45□□□□□ -1.06
NUDCD1-204ENST00000521439 NFIXQ14938 502 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms