RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 CABP7Q86V35 215 aa22.59■■□□□ 1.21
PABPC1-217ENST00000521067 COLGALT2Q8IYK4 626 aa22.59■■□□□ 1.21
PABPC1-217ENST00000521067 MTMR9Q96QG7 549 aa22.59■■□□□ 1.21
PABPC1-217ENST00000521067 GAD1Q99259 594 aa22.59■■□□□ 1.21
PABPC1-217ENST00000521067 TTC12Q9H892 705 aaPredicted RBP22.59■■□□□ 1.21
PABPC1-217ENST00000521067 SORCS3Q9UPU3 1222 aa22.59■■□□□ 1.21
PABPC1-217ENST00000521067 ARL5CA6NH57 179 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 F8W810 466 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 INPPL1O15357 1258 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 ITGA4P13612 1032 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 FOSBP53539 338 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 PTPN5P54829 565 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 MBTD1Q05BQ5 628 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 CAPSQ13938 189 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 MXD4Q14582 209 aaPredicted RBP22.58■■□□□ 1.21
PABPC1-217ENST00000521067 CALCRLQ16602 461 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 IFNLR1Q8IU57 520 aaPredicted RBP22.58■■□□□ 1.21
PABPC1-217ENST00000521067 ZDHHC14Q8IZN3 488 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 ZFP42Q96MM3 310 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 FAM193BQ96PV7 902 aaPredicted RBP22.58■■□□□ 1.21
PABPC1-217ENST00000521067 ANKEF1Q9NU02 776 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 DBR1Q9UK59 544 aaKnown RBP22.58■■□□□ 1.21
PABPC1-217ENST00000521067 PRG3Q9Y2Y8 225 aaPredicted RBP22.58■■□□□ 1.21
PABPC1-217ENST00000521067 DMDP11532 3685 aa22.58■■□□□ 1.21
PABPC1-217ENST00000521067 INO80B-WBP1J3KQ70 363 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 C2CD2LO14523 706 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 ERLIN2O94905 339 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 GLRA2P23416 452 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 KLRC2P26717 231 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 TXKP42681 527 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 POU5F1BQ06416 359 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 ST3GAL1Q11201 340 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 GPR149Q86SP6 731 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 PPFIBP1Q86W92 1011 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 DIS3L2Q8IYB7 885 aaKnown RBP22.57■■□□□ 1.2
PABPC1-217ENST00000521067 CNNM3Q8NE01 707 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 PIGOQ8TEQ8 1089 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 CSRNP2Q9H175 543 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 TMEM60Q9H2L4 133 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 UBN1Q9NPG3 1134 aa22.57■■□□□ 1.2
PABPC1-217ENST00000521067 ZFHX2Q9C0A1 2572 aaPredicted RBP22.57■■□□□ 1.2
PABPC1-217ENST00000521067 B4GALT5O43286 388 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 SOD2P04179 222 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 ARF4P18085 180 aaPredicted RBP22.56■■□□□ 1.2
PABPC1-217ENST00000521067 AXLP30530 894 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 MLH1P40692 756 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 OR1G1P47890 313 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 RARRES1P49788 294 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 SCNN1GP51170 649 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 DSC1Q08554 894 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 MTMR3Q13615 1198 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 NOTUMQ6P988 496 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 CDR2LQ86X02 465 aaPredicted RBP22.56■■□□□ 1.2
PABPC1-217ENST00000521067 UBALD2Q8IYN6 164 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 RNF168Q8IYW5 571 aaPredicted RBP22.56■■□□□ 1.2
PABPC1-217ENST00000521067 TDRD5Q8NAT2 981 aaKnown RBP22.56■■□□□ 1.2
PABPC1-217ENST00000521067 GSTCDQ8NEC7 633 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 PRRX2Q99811 253 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 EMILIN2Q9BXX0 1053 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 BRMS1Q9HCU9 246 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 MRPL17Q9NRX2 175 aaKnown RBP22.56■■□□□ 1.2
PABPC1-217ENST00000521067 USTQ9Y2C2 406 aa22.56■■□□□ 1.2
PABPC1-217ENST00000521067 CFAP54Q96N23 3096 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 DGAT1O75907 488 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 SPATA31C1P0DKV0 1188 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 PCBP1Q15365 356 aaKnown RBP eCLIP22.55■■□□□ 1.24e-40■■■□□ 17.7
PABPC1-217ENST00000521067 KIAA0319Q5VV43 1072 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 RPS6KC1Q96S38 1066 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 APOL6Q9BWW8 343 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 NXF3Q9H4D5 531 aaKnown RBP22.55■■□□□ 1.2
PABPC1-217ENST00000521067 SFXN1Q9H9B4 322 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 FAM86C1Q9NVL1 165 aa22.55■■□□□ 1.2
PABPC1-217ENST00000521067 VPS13AQ96RL7 3174 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 KMT2EQ8IZD2 1858 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 POTEMA6NI47 508 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 NEMFO60524 1076 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 MYBP10242 640 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 AKAP5P24588 427 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 TFDP1Q14186 410 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 CCDC51Q96ER9 411 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 HERC2P3Q9BVR0 1158 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 GPRC5CQ9NQ84 441 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 STK39Q9UEW8 545 aa22.54■■□□□ 1.2
PABPC1-217ENST00000521067 TEX28O15482 410 aa22.53■■□□□ 1.2
PABPC1-217ENST00000521067 NEK4P51957 841 aa22.53■■□□□ 1.2
PABPC1-217ENST00000521067 PLCD3Q8N3E9 789 aa22.53■■□□□ 1.2
PABPC1-217ENST00000521067 NFKBIZQ9BYH8 718 aa22.53■■□□□ 1.2
PABPC1-217ENST00000521067 POLR3FQ9H1D9 316 aaPredicted RBP22.53■■□□□ 1.2
PABPC1-217ENST00000521067 GIT1Q9Y2X7 761 aa22.53■■□□□ 1.2
PABPC1-217ENST00000521067 USO1O60763 962 aaKnown RBP22.52■■□□□ 1.2
PABPC1-217ENST00000521067 SEC24BO95487 1268 aa22.52■■□□□ 1.2
PABPC1-217ENST00000521067 NCBP1Q09161 790 aaKnown RBP22.52■■□□□ 1.2
PABPC1-217ENST00000521067 MAEAQ7L5Y9 396 aa22.52■■□□□ 1.2
PABPC1-217ENST00000521067 TMEM105Q8N8V8 129 aa22.52■■□□□ 1.2
PABPC1-217ENST00000521067 RABGGTAQ92696 567 aa22.52■■□□□ 1.2
PABPC1-217ENST00000521067 B3GALT6Q96L58 329 aa22.52■■□□□ 1.2
PABPC1-217ENST00000521067 RXFP1Q9HBX9 757 aa22.52■■□□□ 1.2
PABPC1-217ENST00000521067 CHST7Q9NS84 486 aa22.52■■□□□ 1.2
PABPC1-217ENST00000521067 A0A1B0GUA9 196 aa22.51■■□□□ 1.19
PABPC1-217ENST00000521067 TTLL13PA6NNM8 815 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms