RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ARL2P36404 184 aa17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 SCNN1GP51170 649 aa17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 PCBP1Q15365 356 aaKnown RBP eCLIP17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 MRPL10Q7Z7H8 261 aaKnown RBP17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 SMG8Q8ND04 991 aaKnown RBP17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 CCDC51Q96ER9 411 aa17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 RPS6KC1Q96S38 1066 aa17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 GAD1Q99259 594 aa17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 EMILIN2Q9BXX0 1053 aa17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 NXF3Q9H4D5 531 aaKnown RBP17.89■□□□□ 0.45
IGHV3-42-201ENST00000520410 NRP1O14786 923 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 WEE2P0C1S8 567 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 SPATA31C1P0DKV0 1188 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 CTSAP10619 480 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 HOXB8P17481 243 aaPredicted RBP17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 ARF4P18085 180 aaPredicted RBP17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 AKAP5P24588 427 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 KLRC2P26717 231 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 AFF1P51825 1210 aaKnown RBP17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 ORC2Q13416 577 aaPredicted RBP17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 GIT2Q14161 759 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 PADI6Q6TGC4 694 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 DEPTORQ8TB45 409 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 TMEM175Q9BSA9 504 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 POLR3CQ9BUI4 534 aaPredicted RBP17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 LRWD1Q9UFC0 647 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 CDH22Q9UJ99 828 aa17.88■□□□□ 0.45
IGHV3-42-201ENST00000520410 ARL5CA6NH57 179 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 B4GALT3O60512 393 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 URODP06132 367 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 XRCC6P12956 609 aaKnown RBP eCLIP17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 EPCAMP16422 314 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 RABEP1Q15276 862 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 SLC27A1Q6PCB7 646 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 SYCE2Q6PIF2 218 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 CABP7Q86V35 215 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 C12orf76Q8N812 135 aaPredicted RBP17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 SNX29Q8TEQ0 813 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 ZFP42Q96MM3 310 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 RAB34Q9BZG1 259 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 MRPL17Q9NRX2 175 aaKnown RBP17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 PRMT7Q9NVM4 692 aaPredicted RBP17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 KLK14Q9P0G3 267 aa17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 DBR1Q9UK59 544 aaKnown RBP17.87■□□□□ 0.45
IGHV3-42-201ENST00000520410 LOC730098B7Z3J9 87 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 H3BQV1 296 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 RPA1P27694 616 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 PLA2G5P39877 138 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 TRAPPC10P48553 1259 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 HERC4Q5GLZ8 1057 aaPredicted RBP17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 KIAA1841Q6NSI8 718 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 TMEM184AQ6ZMB5 413 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 IFT74Q96LB3 600 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 RIPOR3Q96MK2 946 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 C2orf40Q9H1Z8 148 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 DZANK1Q9NVP4 752 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
IGHV3-42-201ENST00000520410 PRKCBP05771 671 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 MYBP10242 640 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 ITIH3Q06033 890 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 POU5F1BQ06416 359 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 PRPF4BQ13523 1007 aaKnown RBP17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 PTPN14Q15678 1187 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 PPFIBP1Q86W92 1011 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 IFNLR1Q8IU57 520 aaPredicted RBP17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 SUSD6Q92537 303 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 KIF2CQ99661 725 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 ADPGKQ9BRR6 497 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 S1PR5Q9H228 398 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 BHMT2Q9H2M3 363 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 POLD4Q9HCU8 107 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 DDX19AQ9NUU7 478 aaKnown RBP17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 STK39Q9UEW8 545 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 KIAA1024Q9UPX6 916 aa17.85■□□□□ 0.45
IGHV3-42-201ENST00000520410 N4BP3O15049 544 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 MTHFRP42898 656 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 PTGDRQ13258 359 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 KCNC3Q14003 757 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 PPP2R5AQ15172 486 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 MAPK6Q16659 721 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 AMHR2Q16671 573 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 KANK3Q6NY19 840 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 TMC5Q6UXY8 1006 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 RABGGTAQ92696 567 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 NECTIN4Q96NY8 510 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 COLEC11Q9BWP8 271 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 VN1R3Q9BXE9 311 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 NFKBIZQ9BYH8 718 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 ADAM7Q9H2U9 754 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 POMKQ9H5K3 350 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 GIT1Q9Y2X7 761 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 PCDHB6Q9Y5E3 794 aa17.84■□□□□ 0.45
IGHV3-42-201ENST00000520410 SOD2P04179 222 aa17.83■□□□□ 0.44
IGHV3-42-201ENST00000520410 CYP11B2P19099 503 aa17.83■□□□□ 0.44
IGHV3-42-201ENST00000520410 GLUD2P49448 558 aa17.83■□□□□ 0.44
IGHV3-42-201ENST00000520410 FXR2P51116 673 aaKnown RBP eCLIP17.83■□□□□ 0.44
IGHV3-42-201ENST00000520410 ATAT1Q5SQI0 421 aa17.83■□□□□ 0.44
IGHV3-42-201ENST00000520410 KRT79Q5XKE5 535 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms